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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c35996_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		A-kinase_anchor_protein_17A_isoform_X1_[Helicoverpa_armigera]
Ontology
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0007165 P signal transduction
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0042113 P B cell activation
GO:0043484 P regulation of RNA splicing
GO:0044822 F RNA binding
GO:0051018 F protein kinase A binding
Transcript
Level		FPKM:6.18 TPM:5.99
ORF EntryO_SariASG11112_complete:A_SariASG_c35996_g1_i3
Sequence
(Nucleotide)
TGTTAGATACAAAAGAGATGGAGTATTGCTCAGAAATGAATAATAAAAGTATTGCTTATA
GACAAACTGACGTTTGGTTTTCATAATTTATTCACAGTGCCAAAACTTATACGTGATTTT
TCTATAAGACTATAACTTTCTGTGAAATTTTGATATATAATTTACTTTGTAGATTATTTC
GACGAGGAAATGGAAGCTTACTTTGAAATATATTTCGCTTCCAACACACAAGGTACACGG
AAAATCTATCTCCAATTGGGAACTTATGGAGAAACTACGAAAAATGGCCCAACCTGACAA
CTTTTCTGTTCTCAAAGTGTCGAAGCAAAGTTTTGAAGTGATTAGATTTGAAGCGGAACT
CGAATGTCGGGATAAACTCGCAAGGGTGTTAGCGAAGCTCGACGGTCGTGTCGTACAATT
AAACGATTACCCAGATGCGTTGAAAGTGAGAGTGACAGAAAATAAATGTGATTTTCCCAC
ACACCATTCATGGGATTCGTTCTTTCGCGATGCGACTGACATGGACGAGATGAAACCCGG
TGAACGTCCAGATACAATTCACATAATAAACCTGCCAATCCGTTGGTTTGTTCATGACCA
AGAACGTGATGAAAATGCACCTCCATCTGAGAGTATATTCAAGAAAGCGTTTGAGAAGTT
TGGTTCTATACGTCAAGTCGATGTACCAGCATCGGATCCATTTAGAATGCAGATGAAAGC
ATCAATACGAGGTATTACTATACCTCCTCAAGAGTCTCTACTTTATTTTGAAGGTTATAT
TCAATTTAATGAATATGTGAGCTTTGTTCGTTGTATGGATTCACTAAGAGGAAAGAAATT
ATTAAGAAGACAAGATGATGTAGCTGAGTGGTGTGGCATTAAAGTTGATTTTGATAAAAC
AAAACATATGACTGATGCAGCTGTGAAACGTAGAGCTATTGTACGTGAGAGATTGGTTGC
TAGGCAGAGAGCTAAGGAAGAAGAGGAAAAGGCTGAGAAAGAGAAAATAGCCAAAAAAGA
GGCAAAAGAAAGACAAAAATATGAAAATTATGAACGTGAAAAATTGCAAAAGATGAGGGA
AAGAGAAGAAAGGAGAAAAAAGAAGCAGCTTGCTAAATTAATGGAGAATGAAAATATGGA
TCTTAATAGCAAAGTTGCTGAGGAACAAAAGAAGTTACTGAGGGCTCAAAAGAAGTTGCA
AGCAATAAGACTGATTGAGGAACTTTTTAAAAGGATAGAGTTACGTCCGGAGTTACAACG
TAACGGGTTACGTGAAGAGCGTTACTATGGTGCCGGTGAGAGAACTGCTCGGGCGCGTTG
TGTCGACAAATTCAAACGGAAACAGGAAGAGGCAGTTGAAGAGCAAAGGAACCATTTGCA
AAGTGCCCTCGATGGACGAATAGTAATTCGTTCCGCTCTCGAAACGAAGAAACCGAAACG
CGAATCGTCGATAAGCTCGATATCGAGCGAGGAAGATGCAGACTTCAAGAGAATTAAATC
GGAGAAGATGACCACGCCTGAACGTGAGATGGAATATAACAAGACGGCAGGACTATACAG
CGTCGCAGGTCCATACGGGTTCGGATACCCGTTCGGAGCCGTGGCGCCGCCCGCTTACCC
ATATCCGCATCAAACGGCGTCTATGTATTATCCGATGAGAGGTGCGTACTACCCGGCGGA
TACGTTCGCGCCGCGGAGAGGCTTCCGGGGCCGGGGGAGAGGCAGAGGCCGGGGGCCCAG
GATGCCCTACTTCGATGGGCCCGACGCCTCACACCAGTACTACAAATACTTCAAGAAACT
GACAGAGACCGAGAGTCGTAACGAGCACGACGACCGTATCCGTTCTCGTTCGCACTCTCG
GTCCCGGTCCCGGTCCCGGTCTCGTTCCCGGACGCGGCGCCGGTCGTACTCGCGGTCTCG
GTCCCGGTCCCGGTCTCGGCGCCGCTCGTACACTCGTTCGCGGTCGCGGTCCCGAGCCCG
GCGGGACAGGAGCAGGAGTCGCCGTTCTAGAACCAGAAGATCTAGTTCTAGAAGTAGACG
CTCTAGGTCTTATCAGAACCGCTCAAGGTCGCGCTCGAGGAAGAGGTCAAGGTCACGCAG
CCGCAGGGCAAGGACACCGGATAAGACGAAGCAACGTTCACCGGCGCGAACAGATAAAAA
GGGACAGAGTCCACCTAGACCGGACGTGGTGGATAACGGAAAAGTGGAATCTCCGAGAAA
ACGAAGGTCGAAGAGCTGGTCCCTCCCGAAGGACTGCGATAGAAAATCTTGGTCGAGAAG
TCCTAACAACGTACAGAAGAGTTAAATTATTCGTCGAGATATGAAATGATTATTAAATGT
AATATATATATATTTAAAAAAAAAACGTTACTAAATTTCTAATTTATAATTTGTTATATT
AACGGGTGTAGGAGTAAAATCGGTTTAAGGAACCGGGGGGTTAATCGTGTTTTCTCATTT
ATGGCGGTTTAATTACTTTGAACTTCATACCTCTATATACAATTCTCAACAAGGATGATA
ACACCACTCTGTATTATCCACGCTATTTTCTATCAATATAAAAATGAAGCCCGCGTCAGA
TTATCCTGTGTTTCCTTAAACTCGAATAAAGTTAGCAGTAAAGTAATATATCGGCTTAAA
TGAGATTATTAGGCCAAAAGGGTCCATATGATGGTCCCGTTTAAACTAACGTGGTATGGA
AGATCGTCGAAAGGTGTTTTACAGCGACGCTTGGTATTTAAAAAAAAGTCAAGCGAACTG
CGCATTTAATGGTTTAAGCTTAAAGAAGCGATATTTTATTAGGATATATTATACCGGTTC
TTCCATACCGCACGTCTCATGGAGATATTTCACGGACACGTTTTCCAACTGAATTCTATA
TAATTCTCACAGAAACAAGATCGAATCGTTTTGAATCATTTAAATATGGATGCATTTTCT
TGTATTAGTACAAATAAAGAAATACTTTGAAAGTTCTTTATCGATTCCCTATATAACGGC
(3000 bp)

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