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Last updated: 2022/11/18
NameA_SariASG_c35992_g1_i1
Scaffold_id
NCBI non-redundant
(nr)
splicing_factor_3B_subunit_1_[Helicoverpa_armigera]
Ontology
GO:0000245 P spliceosomal complex assembly
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005686 C U2 snRNP
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0034693 C U11/U12 snRNP
GO:0044822 F RNA binding
GO:0045815 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0071004 C U2-type prespliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level
FPKM:12.72 TPM:12.31
ORF EntryO_SariASG11105_complete:A_SariASG_c35992_g1_i1
Sequence
(Nucleotide)
GAAATTGCTTTGAATGCTTCGAAATGATATTTATCATTTTCATGAAATTAGTTTGATTTT
TACTACTTCAAACATTATTACATGTGCCTAACATTAATTCTTGTGCTTTGGATAGTGATA
TCGTTATAATGGACAAGATTCCGAGGACACACGAAGCTATTGAAGCACAAATAAGAGAAA
TTCAGTCAAAGAAAAATGAACTACCAGAAAATGGGTCTGGTAAGGGAGTGTCTCTTGGTG
AGACTTACTATGATAGTGACATATATGACAACTCTGGTCAAGGAGGGAAATCCAGATACG
ATGGTTATGTGACATCAATTGCTGCCAATGATGAAGTTGAAGATGATGAAGTGGAAAATG
TTCCTATTAATCAAAAAAGATCTGGATATACAGCACCAGCTTCAATATTGAACGATATTG
CACAGACTGACAAAGACTATGACCCATTTGCTGACAAAAGAAGGCCAACAATTGCAGACA
GAGAAGATGAATATCGCCAAAAAAGGCGTATGATGATAATATCTCCAGAGAGAAGTGATC
CCTTTGCTGAAGGTGGTAAAACACCGGATGTTGGATCTAGGACCTATACAGAGATTATGA
AAGAACAGTACCTCCGTGCTGAAGAAACAGAGTTAAGGAAGAAACTTTTAGAAAGGGCTA
GGGAGGGTACACTGAAGCCGGTCGTGCAATCAAATGGAGAATCTAAAAGTTCAGCAGCTA
AGCGCAAAGGGCGTTGGGATCAGAGTTCAGAAGATACACCTGTAGTAAAAAAAGTTGCAT
CATCAGCCACACCTAGTTCACAGACTACACCATCATGGGATGCTGATAGGGGTACTTGGG
AAGAGACACCTGGTGGCGGGGCTCGTGGGGGTGAAACACCAGGTGCTACTCCATCAGCAC
GTGTATGGGATGCAACTCCTGGTCACATCACACCAGGACACGCCACACCTGGTAGAGAAA
CTCCTGCTCAACATGCGTCAAGAAGGAACCGATGGGATGAGACTCCAAAAACAGACAGAG
AGACACCAGGACATAACAGTGGCTGGGCCGAGACCCCGCGTACTGACCGCGGCACTGGTG
TAGACACGATTCAGGAGACACCAACACCGTCGACAAAACGTCGGTCGCGGTGGGACGAGA
CGCCCGGCGCTACGCCAGCAGCGGCCACGCCCACGCCCTCGCACGCGACGCCATCGCACT
CCACGCCGTCGCACGCGACGCCTTCACATGCCACGCCTACTCCACATACGCCCGTCTTTA
CGCCGGGAGGGTCTACTCCCGTGGGGGTGAAGGCGATGGCGATGGCAACACCGACACCTG
GTCACGTTGCAGCGATGACACCCGAGCAACTGCAAGCATATCGATGGGAGAAAGAGATCG
ATGAACGCAATAGACCTTACACCGATGAAGAACTGGATGCCATGTTCCCCACTGGGTACA
AGGTTTTACCGCCCCCTGCCGGTATGTACTTTCAAAATTTGAGCCCAATTAGTTAAATAT
TTTTTTTATATCCTAAGATTACATCTTAGTTATTAATCCAAACCTTAGTTTCAGGACACA
TGTATTAAACAGATTCCTCTGGACACGGAAACCCCGAAGTGATTATACACAACTATATGA
TAGATAATCGGATACATGTGTTTTATTATACATACATACATTAAATATAAGAAAGAATTT
ATTTTAATAGTCTCGGATTTTATTTTCAGATGAATGATCACTCATGCTTTACGTCACATG
CCCATCGGATAAACTTCGATAATATGCTTAAAGATTGTTACTTGCTGAGTTGATATGAAT
TTGAAATATATATGATATCTGAAGGCATATGAACGTTATTAATATGTAATGTTGTTGCCC
AGGTTATGTTCCGATACGTACTCCTGCGCGTAAGCTGACAGCAACGCCAACACCCTTGGG
TGGTACCCCTATCGGCTTTTTCATGCAGACGGAGGAGTTGGGCGGGTCCGCGGCGGCGGC
GGCGCGGCTCTTGGACCCGCAGCCGAAGGGCACTCAGCAACTGCCCTTCATGAAGCCTGA
GGATGCTCAGTATTTTGACAAACTGCTAATTGACGTCGACGAAGACACTCTGTCACCAGA
AGAATTGAAAGAGAGGAAGATCATGAAACTGTTATTGAAGATCAAGAACGGAACACCGCC
GATGTGCAAAGCTGCACTCCGTCAAATAACGGACAAGGCTCGTGAGTTCGGTGCCGGACC
ACTCTTCAATCAGATTCTACCACTGCTTATGAGCCCCACACTTGAGGATCAAGAGAGACA
TTTACTTGTTAAAGTGATCGATAGGATCCTGTACAAATTAGATGACCTCGTCCGTCCTTA
TGTCCATAAGATTTTAGTTGTAATTGAACCGTTATTGATTGACGAAGATTACTATGCCCG
TGTGGAAGGTCGTGAAATTATATCAAATCTGGCTAAAGCTGCCGGTCTTGCGACTATGAT
ATCAACAATGAGACCGGATATTGACAATATTGATGAATACGTAAGAAATACTACAGCCAG
AGCTTTCGCCGTTGTTGCTTCTGCATTGGGTATACCATCATTACTGCCGTTTTTGAAGGC
TGTATGTAGATCAAAGAAATCTTGGCAAGCTCGTCACACGGGTATAAAGATTGTTCAACA
GATTGCTATTTTGATGGGCTGCGCCATATTGCCACACTTGAAATCTTTAGTGGAAATTAT
TGAACACGGTTTAGTGGACGAGCAACAGAAGGTGCGTACGATAACAGCGTTGGCGAGTGC
TGCGCTCGCTGAAGCGGCCACACCCTACGGCATCGAGTCGTTCGACTCCGTGCTAAAGCC
GCTCTGGAAGGGTATCCGGACACATCGGGGTAAAGGTCTCGCTGCGTTCCTGAAGGCGAT
CGGTTACCTCATACCGCTGATGGACGCCGAATACGCCAATTATTACACGCGTGAAGTGAT
GCTCATCCTCATCCGAGAGTTTCAATCGCCAGATGAGGAAATGAAAAAAATCGTATTGAA
GGTAGTTAAACAGTGTTGCGGTACAGACGGTGTGGAGCCTCAATACATAATGGATGAAAT
ATTACCGCATTTCTTCAAACATTTCTGGAATCATCGTATGGCGCTTGATAGGAGAAATTA
TCGCCAGCTAGTCGATACAACTGTTGAAATAGCGAACAAAGTTGGTGCATCAGAAATTAT
CAACAGGATTGTGGACGATCTCAAAGATGACAATGAACAGTATAGAAAAATGGTGATGGA
GTCCATAGAAAAGATTCTCGCTAATTTAGGCGCGGCCGATATTGATTCTAAACTAGAAGA
AGCTCTTATAGATGGTATATTGTATGCTTTCCAAGAACAGACAACTGAAGATGTCGTAAT
GTTAAACGGTTTTGGTACAATAGTAAATCAGCTCGGTAAACGTGTGAAACCGTATCTTCC
ACAAATATGCGGTATAATATTATGGCGTATGAACAATAAGTCGGCTAAAGTTCGACAGCA
GGCGGCCGATCTCATTTCACGTATAGCTGTCGTCATGAAGACATGCCAAGAGGAAAAATT
GATGGGCCATCTCGGTGTGGTACTTTATGAATATTTGGGAGAAGAATATCCGGAAGTCCT
TGGTTCAATTCTCGGAGCTCTAAAGGCGATCGTTAATGTGATCGGTATGACAAAAATGAC
GCCACCAATTAAGGATTTACTTCCTAGACTCACGCCAATATTGAAGAACAGACACGAGAA
AGTACAAGAGAACTGTATCGATTTAGTCGGTCGTATAGCTGACAGAGGTCCAGAGTTTGT
ATCCGCCAGAGAATGGATGAGGATATGTTTCGAACTACTGGAGCTTTTAAAAGCGCACAA
AAAGGCTATCAGACGTGCCACAGTCAACACGTTTGGTTACATAGCTAAAGCAATTGGTCC
GCACGACGTATTAGCAACTCTACTAAACAATTTGAAAGTACAAGAGAGACAAAACAGAGT
GTGCACCACCGTGGCTATTGCTATTGTCGCCGAGACTTGTTCGCCGTTCACCGTTTTGCC
CGCGCTAATGAATGAATACAGAGTACCCGAGTTAAACGTTCAAAATGGAGTCTTGAAGTC
ACTGTCCTTCTTGTTTGAATATATCGGTGAAATGGGCAAAGATTACATATACGCAATATG
CCCGTTACTCGAAGATGCCCTTATGGATAGAGACCTGGTGCATCGGCAGACAGCATGTGC
TGCTATAAAACACATGGCCCTTGGTGTTTATGGGTTCGGATGTGAAGATGCTTTGGTACA
TTTATTGAATCATGTATGGCCAAATATATTCGAGACTTCGCCACATTTGGTACAAGCGTT
TATGGACGCCGTCGAAGGAATGCGTGTAGCCCTTGGACCTATTAAAATTCTTCAGTACGC
TCTCCAGGGTCTGTTTCATCCAGCGAGGAAGGTGCGCGATGTGTACTGGAAAATATACAA
CACACTGTACATTGGTGGGCAAGATGCTTTGGTTGCCGGTTACCCGAGGATACAGAATGA
ACCAAACAACCATTTCATAAGATACGAACTTGATTATTTGCTATAATTTTAATGAGTTTT
ATTCATAAGTCTCCTTATATTATATAGATTAATTTCAGTCTTATTGATTAAAAATAATTA
TATGTAAAATTGTGTATGTGTGTTTTTGTATTATTCGTACTCAACTCCACGTGTTAGGTT
TTAATGCCACTGGCGCAGAGCCGAAGCTAAATGTCAAGTTCGCAATACAAGTCGCCGAAT
TCACACACATTTTTGTCAAATATATCAATAGTAATTGGTAACGGGAATCTAGAAGTTTCT
CCCTACCGAGAATCGCTCAATGCCGTTAAAGAAGTTTCCTTTAAAGAAAATAGTTTAAGA
GCAATTTCCTCTAGATTTTATACTAGTTTCACCTAAATACTCATTTAGTTTTAATGGAAA
TTATGGTCAAAGACTAGATCTTTAAAAATGTAAAAAAATATTAGTGATTTTGCCATTTAG
ATTTAAACACTAAGACCAAATCCAACTGGACTGGACATGACGGGACGATTTCGGCAGTAT
TTTGATGTTCATAAGAGCCTTATCAGGGCCTAAATTGAATAAAGTATTTTTGAATTTGAA
CAGTAAACTGAATATTATAAGATCGAACATGGCGTCCTATTCCTTTCTACTACTTACGCC
TTATTTTCGGAATTCCCACCATTGCCTATTTATTTATGCCGGAATTATCACTGTTACGTG
TTTGTCTAAAACTAATTGTTACTTTTTGTTTATATCGGTATCCCGCC
(5267 bp)

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