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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c35960_g1_i8
Scaffold_id
NCBI non-redundant
(nr)		PAB-dependent_poly(A)-specific_ribonuclease_subunit_PAN3_[Helicoverpa_armigera]
Ontology
GO:0000166 F nucleotide binding
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000932 C P-body
GO:0004672 F protein kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006468 P protein phosphorylation
GO:0010606 P positive regulation of cytoplasmic mRNA processing body assembly
GO:0031251 C PAN complex
GO:0044822 F RNA binding
Transcript
Level		FPKM:1.64 TPM:1.59
ORF EntryO_SariASG11054_5prime_partial:A_SariASG_c35960_g1_i8
Sequence
(Nucleotide)
TTTTGCTGACATCGGACGCGCAGGTATCGCAAATTCAGGTGGCCAGTTGATCAATACTAC
ATTCTGGATATTTCATCATTTAACAATGTACTCTTATTATTGCCAGACGGTTGAAGGAGC
TCCGAGCTCAACTGAAGATATGGATCCTCCTATGTATCTTCCGTATTCACCGCCGAATGG
ACTTCCTCAAGAGTCCAAGCTTGTAACATACATGAATCATACAGCCACAACTCCCTCAAG
AAACCTGACTCATGCCATGGGGAATTTGAGCTTAGAGACATCGCCTCCATCAGTTAAAAA
GGTGATGGTGAATGAGTTTGTACCCGTCAATTACTACACGCCTCCTCCCTTGATACAAGA
GCCTCCAGAGAACACCCAGATACCCATCACCGTTGTCACAACAACACAACAGATACACCA
GGAAAATGTGGGAGGCACCACTTATTTCTACTCAACTAACACTGAGACAGCTGCTCTCAA
TGCATCGGTTGCTCTAGTGGGCACAGATCCATGCCTCGGGCCCATCATATGCCCCGGAGG
AGTTGCACCTGGGCCCTTCATCCCGCAAATGTACTCTGGTGTACCTCCACCCATTGGCCC
AATGTCAGTCAAGTCAGGTCTCGCTCCCATGTATTATATGCCGGAAACTATACGTTCCGA
GCTGTATGCAAGGAATGAGGAAGCTTATTTGGAACCAGATACAAGTTGTTGCCCAGATGT
ACCGACTAATGTTGAGATATTCACTGATCTTACTCCACTGAAGACTGTGGTTTCACATTC
CGCGCCGTTAACATTCCGCGTTACCCATCGTGAGACAAACGTTCTCTATGTCATACGTCG
CATACCTGACGTTTCGACATATCCGACGGCCCGTCTCGAGAAATGGAAACAAATCGATCA
TCCCAACGTCGTGAAGCTTGAAGATTACTTCCTCACAAACGCTTTTAACGATCACTCTAT
GGTGTTGGTTTATGAGTACCATCCCACATCTGTTACTTTGCTGGATAAGTATCTTTCTGG
GGGAATTGGGAATGCACAGCCGGATGCTAACAGTGCTTACCATGATCCGTTCTCTTCTGA
TCCGGACGCCCCTCGCCCGTATACCCACCAGAAAAATGCTATACTACGAGCTGTGGCGAG
TGGCACTTTACTGCCTGAAGCTGTGCTCTGGAGCATTCTGATTCAGTTGACTGCCGCTTT
GCGTGCGATTCATGCCGCCGGACTTAATTGCAGGAACATTGATCCGAAAAACATTATCAT
AACCGGATGTCGGGTTCGTGTTGCTTGGTGCGGCACCTATGATGTTACACACGCCCCGCC
CAACGACATTGCTCAGGCCCAGCAGGAAGATATGACCTCTTTAGGAAGTTTAGCATTAAG
TCTGGCCTGCCGTAGCATTCATTATGAGAATGTCGGTGCATCTTTGGAAATCATTTCCAG
ATCTTATTCGGCTGATTTCAAAAACTTGATACTGTATTTACTAACGACGAGTCCTGCACG
TCGTTCTATCAATGACTTGATGCCGATCATCGGTGCCAGATTTTACTCTCAGGTGGAAGC
CCTTGAGAGACGTAACGATGTACTTGAAGAGCAACTCGGTGGGGAATACGATAACGCAAG
GCTCCTTCGCATATTAATTAAACTCGGTGTCATTAATGAGCGTCCTGAGCTGAATTTAGA
TCCGACATGGTCGGAAACGGGGGATCGGTATATGTTGAAACTTTTCCGGGATTATGTGTT
TCATTCGGTAAATGAGAACGGGCGTCCATGGTTGGACCAAGCCCATGTGACATACTGTCT
CAATCAACTGGATTGTGGCACTTCAGCTAAGGTGGAATTGATGACACGCGACGAACAGAG
CGTTCTCGTGGTCTCATATGCTGAGTTGAAACATTGCCTGGAACAAACCTACGAAGAATT
AATTCAAACCAGCGCGACCCCCCCTTAGTTATCATTGTATACGTCGTAAATTATAATTTT
AAAATATATGCTCATACGCACTAATATACATACTATTTTGGTGTATCTATGTATATATCT
ATAACACACTAAAGTGTATTTTCACTACAACCCACGTCGATATCATATATATAATGATGT
ACGTGGTATTAGGTACATTACATATGAAATTGGCGATTTGTCGAACCTGGCTACTTTGAT
CTCAAATATCTGGCGGTTGATTAAGCATTTCAATTTTAGGCTTGATTATTTGGGTTTAAA
ATCTAGTGATTCATTTATTTTTGCATCATTTGATCGTTACTTATTACTAAAACGGGTCCC
CTCTTCTAGTAAGGTAGTCCAAACAGCTCTTGAAAATTTCATTGTGTCTCGCTCCCACAA
TTTCCTCACCACTGGAGTCAATGCGTGCATACTCCGTTTGAATAAATCATATAATTTCAT
TTAAAAAAAATCGTTTTACTTTATCAATATAAAACGCTAAATTCGTATGTAAGGACTTAA
CATATGTGTTTATTACAGTTACCAAGTTTCTTAAATGTTGTGAAATGAATTATTTATAAT
AATGCAGAATAATTGCATACGATATTATATTATATATTACAGTAGCGGTCAAATATGAAT
GTAGTTTAATAAGATGAATGTATGTACGCCGTCCAGGTGTGATTAACTCATGTGTGTTAT
AACTTACGTGTCTTGATAACAACTTTGTTATGATTTTTTTATATACGCGATGGAACGGAC
AGATCGGAAGAGCGTC
(2716 bp)

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