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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c35960_g1_i6
Scaffold_id
NCBI non-redundant
(nr)		PAB-dependent_poly(A)-specific_ribonuclease_subunit_PAN3_[Helicoverpa_armigera]
Ontology
GO:0000166 F nucleotide binding
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000932 C P-body
GO:0004672 F protein kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006468 P protein phosphorylation
GO:0010606 P positive regulation of cytoplasmic mRNA processing body assembly
GO:0031251 C PAN complex
GO:0044822 F RNA binding
Transcript
Level		FPKM:14.08 TPM:13.64
ORF EntryO_SariASG11053_complete:A_SariASG_c35960_g1_i6
Sequence
(Nucleotide)
GCAAAATGATCACTATTGCTAAAGAATTGTGAACTGTTTTTCTTGAATGTATCATACAAC
ATAGGTAGCAATAATGTTCGATTGTGCCGTTATATTCTCTCTTACACGATTTCCGTAAGG
CTAGAGTGACAAGTTATTAGTACGTAACATTGAAAGGTGAGCGCTTTTGCTGACATCGGA
CGCGCAGACGGTTGAAGGAGCTCCGAGCTCAACTGAAGATATGGATCCTCCTATGTATCT
TCCGTATTCACCGCCGAATGGACTTCCTCAAGAGTCCAAGCTTGTAACATACATGAATCA
TACAGCCACAACTCCCTCAAGAAACCTGACTCATGCCATGGGGAATTTGAGCTTAGAGAC
ATCGCCTCCATCAGTTAAAAAGGTGATGGTGAATGAGTTTGTACCCGTCAATTACTACAC
GCCTCCTCCCTTGATACAAGAGCCTCCAGAGAACACCCAGATACCCATCACCGTTGTCAC
AACAACACAACAGATACACCAGGAAAATGTGGGAGGCACCACTTATTTCTACTCAACTAA
CACTGAGACAGCTGCTCTCAATGCATCGGTTGCTCTAGTGGGCACAGATCCATGCCTCGG
GCCCATCATATGCCCCGGAGGAGTTGCACCTGGGCCCTTCATCCCGCAAATGTACTCTGG
TGTACCTCCACCCATTGGCCCAATGTCAGTCAAGTCAGGTCTCGCTCCCATGTATTATAT
GCCGGAAACTATACGTTCCGAGCTGTATGCAAGGAATGAGGAAGCTTATTTGGAACCAGA
TACAAGTTGTTGCCCAGATGTACCGACTAATGTTGAGATATTCACTGATCTTACTCCACT
GAAGACTGTGGTTTCACATTCCGCGCCGTTAACATTCCGCGTTACCCATCGTGAGACAAA
CGTTCTCTATGTCATACGTCGCATACCTGACGTTTCGACATATCCGACGGCCCGTCTCGA
GAAATGGAAACAAATCGATCATCCCAACGTCGTGAAGCTTGAAGATTACTTCCTCACAAA
CGCTTTTAACGATCACTCTATGGTGTTGGTTTATGAGTACCATCCCACATCTGTTACTTT
GCTGGATAAGTATCTTTCTGGGGGAATTGGGAATGCACAGCCGGATGCTAACAGTGCTTA
CCATGATCCGTTCTCTTCTGATCCGGACGCCCCTCGCCCGTATACCCACCAGAAAAATGC
TATACTACGAGCTGTGGCGAGTGGCACTTTACTGCCTGAAGCTGTGCTCTGGAGCATTCT
GATTCAGTTGACTGCCGCTTTGCGTGCGATTCATGCCGCCGGACTTAATTGCAGGAACAT
TGATCCGAAAAACATTATCATAACCGGATGTCGGGTTCGTGTTGCTTGGTGCGGCACCTA
TGATGTTACACACGCCCCGCCCAACGACATTGCTCAGGCCCAGCAGGAAGATATGACCTC
TTTAGGAAGTTTAGCATTAAGTCTGGCCTGCCGTAGCATTCATTATGAGAATGTCGGTGC
ATCTTTGGAAATCATTTCCAGATCTTATTCGGCTGATTTCAAAAACTTGATACTGTATTT
ACTAACGACGAGTCCTGCACGTCGTTCTATCAATGACTTGATGCCGATCATCGGTGCCAG
ATTTTACTCTCAGGTGGAAGCCCTTGAGAGACGTAACGATGTACTTGAAGAGCAACTCGG
TGGGGAATACGATAACGCAAGGCTCCTTCGCATATTAATTAAACTCGGTGTCATTAATGA
GCGTCCTGAGCTGAATTTAGATCCGACATGGTCGGAAACGGGGGATCGGTATATGTTGAA
ACTTTTCCGGGATTATGTGTTTCATTCGGTAAATGAGAACGGGCGTCCATGGTTGGACCA
AGCCCATGTGACATACTGTCTCAATCAACTGGATTGTGGCACTTCAGCTAAGGTGGAATT
GATGACACGCGACGAACAGAGCGTTCTCGTGGTCTCATATGCTGAGTTGAAACATTGCCT
GGAACAAACCTACGAAGAATTAATTCAAACCAGCGCGACCCCCCCTTAGTTATCATTGTA
TACGTCGTAAATTATAATTTTAAAATATATGCTCATACGCACTAATATACATACTATTTT
GGTGTATCTATGTATATATCTATAACACACTAAAGTGTATTTTCACTACAACCCACGTCG
ATATCATATATATAATGATGTACGTGGTATTAGGTACATTACATATGAAATTGGCGATTT
GTCGAACCTGGCTACTTTGATCTCAAATATCTGGCGGTTGATTAAGCATTTCAATTTTAG
GCTTGATTATTTGGGTTTAAAATCTAGTGATTCATTTATTTTTGCATCATTTGATCGTTA
CTTATTACTAAAACGGGTCCCCTCTTCTAGTAAGGTAGTCCAAACAGCTCTTGAAAATTT
CATTGTGTCTCGCTCCCACAATTTCCTCACCACTGGAGTCAATGCGTGCATACTCCGTTT
GAATAAATCATATAATTTCATTTAAAAAAAATCGTTTTACTTTATCAATATAAAACGCTA
AATTCGTATGTAAGGACTTAACATATGTGTTTATTACAGTTACCAAGTTTCTTAAATGTT
GTGAAATGAATTATTTATAATAATGCAGAATAATTGCATACGATATTATATTATATATTA
CAGTAGCGGTCAAATATGAATGTAGTTTAATAAGATGAATGTATGTACGCCGTCCAGGTG
TGATTAACTCATGTGTGTTATAACTTACGTGTCTTGATAACAACTTTGTTATGATTTTTT
TATATACGCGATGGAACGGACAGATCGGAAGAGCGTC
(2797 bp)

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