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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c35960_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PAB-dependent_poly(A)-specific_ribonuclease_subunit_PAN3_[Helicoverpa_armigera]
Ontology
GO:0000166 F nucleotide binding
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000932 C P-body
GO:0004672 F protein kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006468 P protein phosphorylation
GO:0010606 P positive regulation of cytoplasmic mRNA processing body assembly
GO:0031251 C PAN complex
GO:0044822 F RNA binding
Transcript
Level		FPKM:5.85 TPM:5.67
ORF EntryO_SariASG11048_5prime_partial:A_SariASG_c35960_g1_i1
Sequence
(Nucleotide)
TTTTGCTGACATCGGACGCGCAGGTATCGCAAATTCAGGTGGCCAGTTGATCAATACTAC
ATTCTGGATATTTCATCATTTAACAATGTACTCTTATTATTGCCAGACGGTTGAAGGAGC
TCCGAGCTCAACTGAAGATATGGATCCTCCTATGTATCTTCCGTATTCACCGCCGAATGG
ACTTCCTCAAGAGTCCAAGCTTGTAACATACATGAATCATACAGCCACAACTCCCTCAAG
AAACCTGACTCATGCCATGGGGAATTTGAGCTTAGAGACATCGCCTCCATCAGTTAAAAA
GATTTACTATCCTCAGGTGATGGTGAATGAGTTTGTACCCGTCAATTACTACACGCCTCC
TCCCTTGATACAAGAGCCTCCAGAGAACACCCAGATACCCATCACCGTTGTCACAACAAC
ACAACAGATACACCAGGAAAATGTGGGAGGCACCACTTATTTCTACTCAACTAACACTGA
GACAGCTGCTCTCAATGCATCGGTTGCTCTAGTGGGCACAGATCCATGCCTCGGGCCCAT
CATATGCCCCGGAGGAGTTGCACCTGGGCCCTTCATCCCGCAAATGTACTCTGGTGTACC
TCCACCCATTGGCCCAATGTCAGTCAAGTCAGGTCTCGCTCCCATGTATTATATGCCGGA
AACTATACGTTCCGAGCTGTATGCAAGGAATGAGGAAGCTTATTTGGAACCAGATACAAG
TTGTTGCCCAGATGTACCGACTAATGTTGAGATATTCACTGATCTTACTCCACTGAAGAC
TGTGGTTTCACATTCCGCGCCGTTAACATTCCGCGTTACCCATCGTGAGACAAACGTTCT
CTATGTCATACGTCGCATACCTGACGTTTCGACATATCCGACGGCCCGTCTCGAGAAATG
GAAACAAATCGATCATCCCAACGTCGTGAAGCTTGAAGATTACTTCCTCACAAACGCTTT
TAACGATCACTCTATGGTGTTGGTTTATGAGTACCATCCCACATCTGTTACTTTGCTGGA
TAAGTATCTTTCTGGGGGAATTGGGAATGCACAGCCGGATGCTAACAGTGCTTACCATGA
TCCGTTCTCTTCTGATCCGGACGCCCCTCGCCCGTATACCCACCAGAAAAATGCTATACT
ACGAGCTGTGGCGAGTGGCACTTTACTGCCTGAAGCTGTGCTCTGGAGCATTCTGATTCA
GTTGACTGCCGCTTTGCGTGCGATTCATGCCGCCGGACTTAATTGCAGGAACATTGATCC
GAAAAACATTATCATAACCGGATGTCGGGTTCGTGTTGCTTGGTGCGGCACCTATGATGT
TACACACGCCCCGCCCAACGACATTGCTCAGGCCCAGCAGGAAGATATGACCTCTTTAGG
AAGTTTAGCATTAAGTCTGGCCTGCCGTAGCATTCATTATGAGAATGTCGGTGCATCTTT
GGAAATCATTTCCAGATCTTATTCGGCTGATTTCAAAAACTTGATACTGTATTTACTAAC
GACGAGTCCTGCACGTCGTTCTATCAATGACTTGATGCCGATCATCGGTGCCAGATTTTA
CTCTCAGGTGGAAGCCCTTGAGAGACGTAACGATGTACTTGAAGAGCAACTCGGTGGGGA
ATACGATAACGCAAGGCTCCTTCGCATATTAATTAAACTCGGTGTCATTAATGAGCGTCC
TGAGCTGAATTTAGATCCGACATGGTCGGAAACGGGGGATCGGTATATGTTGAAACTTTT
CCGGGATTATGTGTTTCATTCGGTAAATGAGAACGGGCGTCCATGGTTGGACCAAGCCCA
TGTGACATACTGTCTCAATCAACTGGATTGTGGCACTTCAGCTAAGGTGGAATTGATGAC
ACGCGACGAACAGAGCGTTCTCGTGGTCTCATATGCTGAGTTGAAACATTGCCTGGAACA
AACCTACGAAGAATTAATTCAAACCAGCGCGACCCCCCCTTAGTTATCATTGTATACGTC
GTAAATTATAATTTTAAAATATATGCTCATACGCACTAATATACATACTATTTTGGTGTA
TCTATGTATATATCTATAACACACTAAAGTGTATTTTCACTACAACCCACGTCGATATCA
TATATATAATGATGTACGTGGTATTAGGTACATTACATATGAAATTGGCGATTTGTCGAA
CCTGGCTACTTTGATCTCAAATATCTGGCGGTTGATTAAGCATTTCAATTTTAGGCTTGA
TTATTTGGGTTTAAAATCTAGTGATTCATTTATTTTTGCATCATTTGATCGTTACTTATT
ACTAAAACGGGTCCCCTCTTCTAGTAAGGTAGTCCAAACAGCTCTTGAAAATTTCATTGT
GTCTCGCTCCCACAATTTCCTCACCACTGGAGTCAATGCGTGCATACTCCGTTTGAATAA
ATCATATAATTTCATTTAAAAAAAATCGTTTTACTTTATCAATATAAAACGCTAAATTCG
TATGTAAGGACTTAACATATGTGTTTATTACAGTTACCAAGTTTCTTAAATGTTGTGAAA
TGAATTATTTATAATAATGCAGAATAATTGCATACGATATTATATTATATATTACAGTAG
CGGTCAAATATGAATGTAGTTTAATAAGATGAATGTATGTACGCCGTCCAGGTGTGATTA
ACTCATGTGTGTTATAACTTACGTGTCTTGATAACAACTTTGTTATGATTTTTTTATATA
CGCGATGGAACGGACAGATCGGAAGAGCGTC
(2731 bp)

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