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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c35683_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		U3_small_nucleolar_RNA-associated_protein_6_homolog_[Helicoverpa_armigera]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
GO:0030515 F snoRNA binding
GO:0032040 C small-subunit processome
GO:0034388 C Pwp2p-containing subcomplex of 90S preribosome
Transcript
Level		FPKM:16.88 TPM:16.35
ORF EntryO_SariASG10702_5prime_partial:A_SariASG_c35683_g1_i1
Sequence
(Nucleotide)
GCTCAACGTCTCAACAAACTGTTTAAACAGTTTATATATAGATTTCAAAATGATGTCGAA
ATTTATTTTGAGTATATTCGATTCTGTAAAAGTGTTGGATTTGTTCAAGCAGTATCTGGT
ATTATAGGTCAAATGCTTCAGGTTCATGGTGACAAACCAAAGATGTGGCAGTTGGCAAGT
AAATGGGAAAGTGTGGAACAGAATAATTTAGAAAATGCAAGAAATTTCCTATTGAAGGGA
CTTCAGAGACACCCTGATTCTGAAGTTCTTTATTTAGAACTTTTTAATATAGAACTCTTA
GCTCTTACATTTAAAGCAGAAACTGATGAAGAAAAGGAGAAATTATCTAAAAGGGCAGAT
ATTGTGTGGAGGAATGCAGTAAAAAATATAGACACTGTTTCCATCCTATTCAAGTTTTAT
GATATGTGTTTAAAATATGGTGTGAAGGATACATTTTCAGATGAAATTAAACAAGAGATT
TGGTCAAAACATGACAATCAGGATGTTTGGTCATATATTGCATCAAAGGAATTAGAGGGA
CATCATTGGAAAGAAATTGAAGAGTTTGTGGATGATGAAAGTGATTTTCCTCCAGTTGTT
AATAATGTTATCAGTATTTATGAAGAAGCTTTACAAAAGTTTCCAGATGAAAAGTTATGC
ACAAAATTTATTCATGAATTACTAGGATTATGTGATGATGTTTGCCTTGATGAACAGAAG
ATAAAAGCGGTTAAGCATGCTTGGTTCTATGGTCATGAAAATGGTTTGCTCACAAATGAT
ATGTACACTTTTGGCATAGAAATGTTGAAATTAGAGAACAACACGTCAAATGACGAGTTG
TGTGAGATACTTGAAGCAGCGACCAAGAGGAAACCAATTTTAAGAAGTATCTGGGAGGAA
TTAATTTTACTCAGTAAGAATGATGAAAAGAAGATGTTGTCAATATTACAAGAGGCCACA
AAAACACTTAAGAGTGACAAGCTACATTTATACAATTTAGTATTGGATAATATCACATCA
AGTGATACTTTAAAAAAGTTTTATAAAAAGTTTCAAAGTTGTGAAAATGCCATCATGCTG
GCTGTAAAACCAAAGCTTTTACAGAAAACATATGAACACAGTGGACTGAAGGTTGCCAGA
GAATTATATGAAGATTTGATTAAAACTCCACCTACACAAATTGAGGTTCATAAAGTGATG
ATTGGTATAGAAGAATCACAAGAAAAACTTAGTTTAAAAAATACAAGGAGATGCTTTGAA
TGTTATGTTCAACATCATGGTGACACAAGTGTTGATGTTTGGATGGACTTTATGAAGTTT
GAAATAAAAAATGGTAATGCACAAGCATCAGCTGCATTATATAGACGAGCTCTTGGCATG
TTGAAGAAGGAGCTAGTCGATGAGTTCATCAAAATGCAGACTTTAGCTAAAATAAAGTAA
TTGTTTATAAAAAAAA
(1456 bp)

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