SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c35565_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		rRNA-processing_protein_UTP23_homolog_[Bombyx_mori]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0032040 C small-subunit processome
GO:0042254 P ribosome biogenesis
GO:0070181 F small ribosomal subunit rRNA binding
Transcript
Level		FPKM:3.94 TPM:3.82
ORF EntryO_SariASG10571_complete:A_SariASG_c35565_g1_i1
Sequence
(Nucleotide)
GCTGTTATGTATATTAGTTTACTAGTGTTTCGATACATTCTTAATTAATAAGTAAATAAT
GTTTTGATTCTTCTAGAATTTAGTGATAATAAAAAATCAATTTCTAGGTCTTAAAGATCG
ATTTTTCAATTAATCGTTCTCAGATCGTCATCCCTACTGCCTGCCCTATCCCTATCGGAC
TAATCGAAGGAATGTTTCTATTTTCTAATTGTTGTTGTCTGTCGAACGTACAATAATATT
CCTGAATCAAAAAACAGTAATAGTTCAAGGTTTGTAATTTATTTATAGAAAATGAGAATA
ACTCGATACAAAAAAGTCCAGAAGTACCTCAAATTTTATTATAACAATTTTGGTTTCCAC
CAACCTTACCAAGTACTGATAGACGGAACATTTTGTTTTGCTGCTTCGAAAGAGAAAATC
AACATTAGAGAGCAAATACCAAAATATTTAAATGCACAAGCTAAACTACTTACAACAAGA
TGTATCATTATAGAAACTGAAAAAATTGCTAAAATAGCCCATGGCGCATTAACCATCTTA
AAACAATTTGGAATACATGAATGTGGCCATAAAGAACCAGTTCCTGGATCAAAATGTATT
TTATCTATGATTGGAAAGAGTAACGATAAACATTATATCTTAGCAACACAAGATCGTGAT
TTACAAGAGAAACTAAGACAGAAATCTGGAGCACCTCTATTATATCTACACAACAAGTCA
CCAACCCTGGAAAAGCCGTCACAGGCTAGTTATGAAAAAGTCGGACAAACAATACAATCC
AATAATTTTATTTTTATTTCTGAAAGTCAAAATGATGCATTAAATAATATGAAAAAAGCT
TTAGGTGTGCAAGAAAAGGTTGAGGAAACAAAAATTGTAATAAAAAAGAAGAAACCTCAT
AATCCTAATCCATTGTCTTGTAAAAAGAAAAAAAACAAACCACAGAAACATACTGTTACA
AAAGACAATCTCAGGGAAGCTAGGAAAAAAAAGAAAAAAACGTCGAAATATATAAAAGAG
CAGTTGAAAAATGTTTTAAGTTCTACTTAATAAATTATATAAAGAAAAAAAAAA
(1074 bp)

- SilkBase 1999-2023 -