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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c35457_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		HEAT_repeat-containing_protein_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030515 F snoRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0030686 C 90S preribosome
GO:0032040 C small-subunit processome
GO:0034455 C t-UTP complex
GO:0042254 P ribosome biogenesis
GO:0043066 P negative regulation of apoptotic process
GO:0043487 P regulation of RNA stability
GO:0045943 P positive regulation of transcription by RNA polymerase I
Transcript
Level		FPKM:19.50 TPM:18.89
ORF EntryO_SariASG10461_5prime_partial:A_SariASG_c35457_g1_i1
Sequence
(Nucleotide)
CAGAACAGGTTTTGCATCATACAATGGAAATATTCACCTTTATGGGTTCATCTGTTCTAA
GGCATGACGATGCTTACAGTTTCCAAATTATTTCTAAAATAATAGAAACTTTGATACCAA
TATTGGTAAAGCTAGATAAGGAAATTGAGGAATACACTGAAAAGGAATTAAAAGTGTTAC
ATAATCGAGTTGTTCCAGTGTTGCGTATATTCGCTGATGTAGTTCTTCATGTCCCTGAAC
ACAGAAGACTGCCATTGTTTAAGAAACTTATCGAAACATTAGGACCGAGTCAATTCCTTT
GGGTATTCCTGGCGTTATTATTAGAGACTCATATTGCACACTTCAACGATAATAAGAAAC
AAAACAAACAACATTCGCGAAGTTTGGCTGAACAAGAATCACCGATAAACAGACTAGATT
TTGGGCAAAGTATCTTGCTTGAATTCCCTCCAGAAGTTTGTTTAGATAACTTTATAAAGT
TAATTGTTTATATAAAATCTCTGCCGATGCAAAAAGACGAGGATTCAATGGCTGTTGATG
TCGATCCGAGCGACATATTTAGTGTCAATGGCCATACAGCAGTACAGTTACGCCATTATA
AATATGTTATAATTACGTTTATGAATACGTGCTTAGTCTCATCGAGATTTATATACCATA
TGGGTCTAGCTACTGATGTTTCGAAGATGGAAACATGTTTCAAAAGTTTAATTATTAACA
TTTTGACATTTATACAAACAATTTCTAAAGTTAGTGACGAAAAAACAGCGAAATATTGGC
GAGTCATGTTACATCACAGCTACGACTTGCTAGATCACACCAACAATCTGCTATCGCCAA
CAATGTTCTTGATGGTGATCAGAGGTTTATTTAAGCATACATTGCAAACAGTCAGAAGGA
AATCAATGGAATTGCTGAACTCAAAAATACAATCTAATCCAGAAATATTTGAAGATGTTG
ACCGAGATTTAATATATTCACTAATACCGGCTTTGTTAGACATTATAAAAACTATTGAAG
ATAAAGATGTGAATCTAAGCGAAACTGTTGCGCAAGAGATAGAACTTAATCAACAGACGG
CTTTATTGTCCCTAAAATTACTAACGCGAATGCTTGCGTCAGAAAATCCAGAGCCATTTA
AAGAGGTGTTAGAAAAAGTCACACAATACACGTGCGATTCGAATATATCTGGAAATGTTA
TGGCTTCGATTGTTTTATGTTTGGCTGAACTGTGTAGTAACTTGAAAGCGCACGCTTTGG
CCAGTTTGCGTAAATTTATGCCGGCTCTGATAAAAGTATTGAAGAGACAAAGAAAAGCGG
AAACACCAGAATTAGTACTTTTGAGCACAGTGACGGCGATAGCGAAAATAGTTGAAAGTC
TTCCGTTATTCCTGAGCCCGTACCTACAGAAAGTATTATACGAATATTCAATTTTGTTTG
CAAAGTGGCAGAATCAGGATCAAGATTGCAGTAAAGTGTCAGCGATAGTGGGAAAATTGT
CGAATATTAGAAAGAAGATAGCGGAATCAATACCACCGAGAGTATTGATACCTGTTGTTA
ATGAAACCCATCAGTTACTGTTAGAAAAAGAGAACTATGACGCAATCGGACCCGTGATGT
CAGTTTTAGCTGACAGTTTCACCAATGTAACTACGGCAGATTTCACAGCGTTGCAGCAAG
ACTTGACGGCGTTCTTTTTGACTGCTTTGCAGCTGCGTAGCGATGCAGTTGAGAAGGAGA
TTGGAGGATCTGTCATAGATAGAGCAGAAGATGAAATTGTGAATGCCCTTGTATGTTTAG
TGCTCAAGCTTTCCGAGACTAATTTCAGGCCATTGTATTTCAAGATATATGACTGGGCAA
TAAGGACTAATGTTGAAGGGCACAAGGACCGAACGATTACTTTCTATAGATTAAGCAGCG
TAATAGCGGACAAGCTGAAAGGCTTATTCGTTCTCTTCGCCGGTCATTTTATCAAAAACG
CTGCAGACCTTCTCGACGCCTGCAACGGCACGAAAACTGAACAGTTATACTTTGATAATG
TAGATAAATGTATAACTCTCATTCGATATATTATAAAGACGCTTCATGTCGTATTTTTGT
ATGATAGTCAAAACTTTTTGAATAAAAATCGTTTCGAAACTTTAATGCAGCCGATTGTCG
ATCAGCTCGAGAACACTTTAGGTGATTTAACAACTTTTAAGGTTAGGGCGGTCGAGTTGA
TAATTCCTTGTGTATCCCAATTTGCCGTAGCCACAGCCGACGATTCGCTATGGAAGCTGT
TAAATTATCAGATTTTACTCAAGACGAGACATAATGATGCCGATATAAGATTGACAGCTC
TAGAATGTTTGGTTGCTATGGCAACGCAACTCGGTACCAGTTGGTTACCGCTTCTGGCCG
AGAGTGTTCCATTCCTCGCCGAACTTCTAGAAGACGGCGACCCGAAAATTGAAACATGTA
CAAAAGACGCAATCAGGAAACTGGAGCAAATACTCGGGGAGCCATTGGAGAAATATTTTT
AAGTTACAAATGTATAAAATTATTCATCATTAAATTTTACAATATTTTAAAAAA
(2574 bp)

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