SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c35425_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		transcription_initiation_factor_IIA_subunit_1_[Helicoverpa_armigera]
Ontology
GO:0001094 F TFIID-class transcription factor complex binding
GO:0001128 F obsolete RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly
GO:0001129 F obsolete RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly
GO:0005634 C nucleus
GO:0005672 C transcription factor TFIIA complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0017025 F TBP-class protein binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051123 P RNA polymerase II preinitiation complex assembly
Transcript
Level		FPKM:14.51 TPM:14.05
ORF EntryO_SariASG10398_complete:A_SariASG_c35425_g1_i1
Sequence
(Nucleotide)
CATCAATAGTGGTAATAGTGGATTTTAGCAATAACTGAAACTATTTTATTGAGTGTTACT
TGGCATTGACTTGTTGAAATGTGAAAACAAATTGATACGTATTCATCACTGAATGATCAC
TGCTGATCTCATAATTTGTGTGTTTGTTTTTTAAGATCTAGTTGCTTAGCAAACTTATTC
AAGATGACGATGAGTCAGATGGCAGTTATGAAACTCTACAACACTGTTGTAGATGATGTG
ATAGCCGGGGTCAGAGATTGTTTCCTTGATGATGGTGTGGATGAGCAGGTGCTGCAGGAA
TTAAAACAGTTATGGAAAACAAAACTTCAAGCTACAGGTGCCATGGATCTGCCTCAACCA
GAACCGGTGCTGCCTCCACCTCCTGTATTGCAGAGTTTCCAAAAAGCTAACGGGAGTAAT
GTCTTGCCTAAGAGAACTGAATTAGCTCATCAAAGTTCTAGCCAACAAAGTACTAGTGTA
GAACATGGAGCGCTGGGTTCAAATATTGCTGGTACACATACTCAACATGTTTTAGATCCT
AATAATAAAGTGCCAGTACAGTTAACTCTACCTGCTCAACCTGGTGTACCAGGCTCACAA
CCTCGTTCTTTTACTATACAAATTCCAGCATCGGCATTGAATGGTAACAAACTCCATCAA
GTTCTTACTGGTCCAATTATCAATGCTACAATCAGTCTACCACAACCCCTAGCTGCAACT
CTACTTCAGCAACATATAAATTCTGCTTTGGCAGGACAACAAAATGAGTTTGATGGTGGT
GGGGGTGGTAGAAGTGGTGCTGCCCCGTTCTCATTAGACGGAGCTTTGGATTCTTCTGAT
GATGAAGGTTCAAATGTAGGTGATGGCTCTGAAGAGGGGGCTGGTGATGATGATGAAGAT
GATGATTCCCCTGAAGAGCGTGCAGAGGAAGAGGAGGAAGAGCAGAATGAGAGTGGTGGT
GCTGAAGAAGAACCTCTCAATTCAGGTGATGATGTATCTGATGAGGAGCCAGGTGATATG
TTTGACACAGATAATGTGGTTGTTTGCCAATATGATAAAATTACTCGCAGTCGTAATAAA
TGGAAGTTTTACTTAAAGGATGGCATTATGAACCTCGCTGGAAAAGATTACGTATTTCAA
AAAGCAAATGGTGATGCAGAATGGTGAAAACTTTTTTTACCAAAAACAAATGGACAGACT
GTGTATTTTTATAGTGTAAAATTTGTTATATCTTTTGACTGTTGGGTGTAACTGATAGAC
ATTGAACTGTTATCTCAAGTATATAATATATATGTATATTGAATAGGTACTTATACTTTG
GATGACTTGTATTGATTTGTATGTAAATTCAAGTATATAATTTGTATTTCATTTTTGTTA
CCAATAATTCTTTTTTTGTTAATTACATAACAGGAAAAACATGTAACAATTTCAATTTCA
TTTTAAAAGAGCCTGTGATATAATTAATTGTCTTGTGTATAATATTCAATAAATTCAGAT
TTAAATGTTTTGACATTAATGTAGGGCTAAAATTTACATCACATGAAATTACCATAGCTC
AGAAGACTTAATGGTTTCAACTCTTCAGTTCAATTCGATCTTTAAAGATACTCTTAAATG
CTTTTATATATCACACATTATTATATATAGAATAAATATGTTATTTACTCAGTAAACTCT
TAATTACATGAATAAAATGGTCCTAATGTTACAAGAAAGAAGTAGTTTCTGCAGAGATTC
TAAATTGTGCACCATTTTTATGTGATTAAATCATAGCATTTGCACACAACTATGGAGGAA
TGCTAGCAATTAAATATATCCATACTGCAAAGAATGCAAAATAATATTTTAGGAAGCATA
GCTAAAGTACCATGATTCATACTATTATTTAGGGATTAAAATTGTAAAGGAGGAAATAAC
CAACACCACACAAAAATATCATGAAAGACTGCAAAGGCATCATAATACACTGGCTTTAAA
GCTGACAACTCCTAG
(1995 bp)

- SilkBase 1999-2023 -