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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c35411_g1_i4
Scaffold_id
NCBI non-redundant
(nr)		LIM_and_SH3_domain_protein_Lasp_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005925 C focal adhesion
GO:0007279 P pole cell formation
GO:0007283 P spermatogenesis
GO:0007291 P sperm individualization
GO:0008270 F zinc ion binding
GO:0014881 P regulation of myofibril size
GO:0015629 C actin cytoskeleton
GO:0030018 C Z disc
GO:0031672 C A band
GO:0045214 P sarcomere organization
GO:0045856 P positive regulation of pole plasm oskar mRNA localization
GO:0046872 F metal ion binding
GO:0070864 C sperm individualization complex
GO:0071689 P muscle thin filament assembly
Transcript
Level		FPKM:4.68 TPM:4.53
ORF EntryO_SariASG10386_5prime_partial:A_SariASG_c35411_g1_i4
Sequence
(Nucleotide)
CGCACAACCAACAAGCTCACAACCAACAAGCGCACAACCATAACCAAAACCGCTATCAAG
AGCCGCAGTATTACAAACCGAAGGAGAATTATCAACAACAGGGTCAAGATTACCAGGGTC
AATATTACGGGCAGTATCCGCAGAATTATGGTGTACCCGCACAACCAAAGATCGGGAGGA
TACAAGACTATGACCCTTTAAGTGACGGACCTAGAGCACCTCCTAACACCCAAAGGGCAT
CGGCCACTTTGATATATAACAGTACGAACGATGGAAAACAAAGAGGCGGTCATCAACACA
ATCAGCAGCAAAACAGACAGATAGGGCGCGTCACAGACCTGGACCCCCTAGCCAATGAAG
TCCCGAGACCCCCGTCCAGCCAACAGAATCAGCGAGTGTTCATAGCTATGTACGATTATG
AAGCAAACGACAGCGATGAGGTATCGTTCCGCGAGGGTGATCTGATAACGGACGCGAGCG
CTATCGACGAGGGCTGGATGACAGGACGCGTGCACCGCACCGGTCACGCGGGTATGCTGC
CAGCCAACTACGTAGAACCGGCACCCGCTTCTGCCCTCAGGCATCTCGACTGATACATCA
TTCTGCCTTCCCTCGTACACACGCCTAATAACACATTACGTTCTAACAATCTATGTCGTT
CATTATAAAAGTGAATTGAATTTTGGAATAAGCTCGAAAGGCCTTTTAATAAACCAAAAA
AAAATGAAAAAAAAAATCAAAATGATTATAAAAGTTTTTAAGATAAATTACTTTGTATCA
AAAATATGCACGTGTATTTTGATACGTGGTCAATAGACGATCCCATACTTACTGACTTAT
AATGTTTATGTAATAAATATTATTTAGCCGTTTTAATTCTATTCAGTACATAAGTGATCA
CTTATATACATAATTTTTATAAAGATAGAAAAAAAAATGGCGACTTTGTCTTGAAAAAAA
AAAATAGTTACACCATTTTTACAATGAACGAGATATATTGAAAACAAATCTTTGCAATTA
TACCGTTTATTAATAATAGTTTTAGTAAAATATAGGGTAATTCTTCTGTCAATTTTTCAG
TTACAGGGAAATTACTTTTCCAACCATGAGATTCAATTTATTAAGTACCTCCCTCCCATT
GGTCAGGTTAAGTCGTTGTTAATAACCAGAAGTATGTCATCCAAATAGTCAACGGTTCGC
AGTAAATTATCTTTCCAATTACTGTAAAAAACATCATAAGGGGATATTCATGGGTTACGT
GAACGCATGATTTTGAATCTTTTGACTTTCCGTTTATCAGCAATTAAAAGCAAAAAATAA
TAAGTAAATATTCCTTACGTAATTACCATTCAGACGCCCTCGTCTCCCATATCATCAAAA
ATAAACAAAGCATAGATCCTGACGTCTGACCTGTCTGTATTGGTCATTTAATAACTAATA
ATAATCAGGATTTTACAACAAATTACTAATCAACCCGTAAGTGAATGTAGAAACACATTT
ATTGACATCATTTCAATTCTAAAATAATAACAAATGTTTCTAGAGAGTACCGTTCGAAGA
TGTCTATTAAATGAATGAGATTATTTATTTCTGTCTAATCAGATTTTAGCTATGTAGCTA
AAATTTAAAATAACAATAATATTAATCATATTTATAAAAAAAAAATTGAAAGATAAAAAA
CCCCCAATTAATTTTCCTGAAATTTAAGAGTAAAATCCCCGTGTTGGCAACACTGCGAAT
ATGTCAACGTCAATGCTGCTTCCCTATAAGACCATTTTTGAGACTTGTCATTTGAGACCA
AAATAGATTGACTTTGGTATATAGTTATTATATAAGAAAAATAATTGGGAGATCGGAAGA
GCGT
(1864 bp)

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