SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c1285_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		repressor_splicing_factor_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001178 P regulation of transcriptional start site selection at RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0010468 P regulation of gene expression
GO:0031440 P regulation of mRNA 3'-end processing
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
Transcript
Level		FPKM:654.76 TPM:634.06
ORF EntryO_SariASG167_complete:A_SariASG_c1285_g1_i1
Sequence
(Nucleotide)
CTCTTCCGATCTCCTGGTAACACTGCCCCGCCGTATACGGTCAAACCAGTCGATTTAATC
GTTCACTCACTCCCCAATTCCTCCGGCGTAGTTTATGTGTTAAGAATTTTTATTTTTAAA
AATTATAAATATTATATTATTTTGAGTAATTTTAGGCTAAAATTAATTATAAAGTAATCT
TACCTCGTAAACACAAACCATACAATCATGAGCAGTGGAGGTACTCGCGTATACGTCGGT
GGGCTCGTAGAGGGAATCAAGAAAGAAGATCTCGAGCGGGAGTTTGATAAATATGGAAAA
TTAAACTCAGTATGGGTAGCATTAAATCCCCCTGGTTTTGCATTCATTGAATTCGAAAAC
TTGCAAGAGGCGGAGGATGCGTGTAGCGCCATGAACGGCATCGAAATGTTAGGCGCGACT
CTCAAAGTAGAAATCTCTAGGAAGCGTGACGGACCGCGTAGAGGCAATTTTAGAGGCGGC
CGCGGCGGTAATTTCAGGGGTGGACGCTCTTTCGGTAGTCAGGGGGGCAGATTCAATAAC
TCATACGGTGGTGGTGGCGGCGGCGGTGGCCGACCATACAACCGCAGTGGTGACGGATAT
GGCTCTGGTGGTGGTGGCGGCGGCGGCGGTAACTTTAGGTCCAGGTCGCCATTGTCCCGG
TATTAATTTTAGTTCATAGCGTAATTTAGGTTTAGTGTTATCGTAATCTGAAGCCTTCCA
AGTGTTAAAATTCAATGAATCCTGGGGGTTTAATGCTAGGAAGAGTTTAATATTTCAAGG
AATTAGAGTTCCTTGTTATATTCCGTCTCGAGCCACTCATCATCGAGATTAACATTCAAG
AACAATCTTCAGCAATTATTTAACATTCTACCTAAGTAATCTAGTGGTTAAGGCATTATA
AATAAAACTTTATGACTACTTCATCGAATTGTTTATTTTCTTTTTTATTTTACATAACTC
GGACAGCCGAGTTAGCTAAATTTGTTTAAATTATGTTTTTCATGAATATGTATGTACCCC
TGGCTTAGGTTATGTTATGTTTAGGCATTTTTTTTAAATAAAATGATACAAATAAAAAAA
A
(1081 bp)

- SilkBase 1999-2023 -