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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c12508_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		putative_spliceosome_associated_protein_[Danaus_plexippus_plexippus]
Ontology
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005684 C U2-type spliceosomal complex
GO:0005686 C U2 snRNP
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0071004 C U2-type prespliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:38.92 TPM:37.69
ORF EntryO_SariASG1324_complete:A_SariASG_c12508_g1_i1
Sequence
(Nucleotide)
TGTGATCAGAGTTCAAGTATAGTGTATTTTATCTAATGTGTAATTTATCTATGTATCAGA
GTTTATAATTTATATTCTGTGGTCGTTTTCTAATTATTGGAATTTGTTTTGTGTTGTAAA
AAGAGATATTATTTGCGTAATTTATCCTATATAGATGTTTAATACACTTTGAAAAATTAA
GAACGTTTGCAGGGCAAAATGCCTTCCATTGATGTGATGCTCCCACCGGGGCAAACGCTC
GATGTTCCACCAGACGAGCCTCAGCCACCTCTAGCACCTGTGATAGGCATTATCTATCCG
CCACCTGAAGTGAGGAATATTGTTGACAAGACTGCTAGCTTCGTTGCTCGCAATGGTCCT
GAATTTGAAGCAAGGATCAGGCAAAATGAACTTGGAAACCCAAAATTTAATTTTCTCAAT
TCTGGAGATCCTTACCATTCATACTATCAGCATAAGGTCAAAGAAATTAGAGAAGGAAAA
GGTCCAGAATCATTACCCCTTCCCTCTATTGCACCACCTTTACAACAACGTGCTGGCCTC
GCTCCTGCGACAGCGGCTCGTCAACAAGAGTTACTAAAAGCTGCAGTGCCGAGTGAACCC
CCACCACCACGTGACCCTCCACCTGATTTCGAGTTCATTGCTGATCCCCCTTCAATATCA
GCCCTCGAATTGGACATAGTGAAGCTTACGGCACAGTTCGTTGCTCGTAATGGCAGACAA
TTCCTCACGGACCTCATGAAGAAGGAGGAGCGCAACCACCAGTTCGATTTTCTTCGGCCA
CAACACTCTTTGTTTCAATATTTCACACGGCTACTAGAGCAATACACAAAAGTTTTGCTT
CCTCCAAAAGAACTTGTCTCGAAATTGAGCTCTGAGATCAGAACCGGAGTTCTAGATCAT
GCTAAGAGTCGCGCGGCTTGGCATTCGCATCAGGTACGGCGCAAAGCGGCTGACGAAGCG
AAGATTGAAAAAGAACGACTTGCGTACGCGTCTATAGACTGGCATGATTTCGTTGTTGTC
GAGACTGTGGACTACCCGGCGGGAGAGCTGGGTGAATTCCCTCCACCGACTACCCCTCTA
GAAGTGGGGGCGAGGGTGCTTGCACAGGAAAGAGGAGAGGATATAGCTCATACTGCCAAT
GACGATGACGACACCGAGATGCAGCTTGAGTCCGAATCGGAATCTGACTCCGACGACGAA
CTCGCCGAGATGGAAGATCGCACTCAGCATCAACAGCGACCAGATGACAATCGCGTGCAG
GACATGGAAGAAGAGAGTTCGTCGTCAGATGACGAAGTGGCACCACCGCGTGGAGAGGAA
GCCCCGTTACCACCGCGGCCAGATCGTGTTGTCGTCAAAAAATACAACCCGAAGGAGGCG
AAACCTCGCCCTCCCACTACTGGGGAGGAATGGCTCGTGTCGCCCATCACTGGCGAGAAG
ATTCCCGCGAATAAGGTGGCGGATCACGTGCGCATCGGTCTGCTGGATCCACGCTGGCTG
GAACAGAGAGACCGTGCTGCTGCTGAACGTACTGATAAGGATGAAGCTCTTGCCCCTGGA
GCCGCCATCGAAGCATCCCTGAAACAGCTGGCTGAGCGTCGTACGGACATCTTCGGTGTG
GGCGACGAGGAGACAGCCATCGGTAAGAAGATCGGGGAAGAGGAGAAGCGTCGCGATGAC
AGGGTCACGTGGGACGGGCACACCTCCAGCGTGGAGGCTGCCACGCGAGCTGCACGGGCT
CATATCACGCTCGAGGATCAGATACAGCAAATACATAAGGTGAAAGGTTTGCTGCCGGAT
GAAGAGAAGGAGAAGATAGGGCCGAAGCCTGTTCCCGCGGCCAGCGCTAGTCGTACAGCG
GTCCCCCGCCTCCCGCCCCCGCCGGCTCCGCCCCACGCGCAGATCAGCGC
(1910 bp)

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