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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c12472_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_cullin-3_isoform_X2_[Plutella_xylostella]
Ontology
GO:0000139 C Golgi membrane
GO:0000209 P protein polyubiquitination
GO:0003674 F molecular_function
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005794 C Golgi apparatus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006513 P protein monoubiquitination
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0007229 P integrin-mediated signaling pathway
GO:0008150 P biological_process
GO:0016192 P vesicle-mediated transport
GO:0016567 P protein ubiquitination
GO:0017145 P stem cell division
GO:0030030 P cell projection organization
GO:0031208 F POZ domain binding
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031463 C Cul3-RING ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032467 P positive regulation of cytokinesis
GO:0040016 P embryonic cleavage
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0048208 P COPII vesicle coating
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:26.94 TPM:26.09
ORF EntryO_SariASG1316_3prime_partial:A_SariASG_c12472_g1_i1
Sequence
(Nucleotide)
CCCTAGTACTCAACTAACCTATGCCTATGGATGACAAAATTGAAACAATTGAATAAAAGA
ACATAATAATATTATATCTACTGATCACATAATATATATTTGCGATCAAGCAACAGTGAA
TGATTTTAATTCGTGTATACTTGAGGATAACCATGTTTTATTCCGAAAATAAATGAATGA
ATAGTGACATAATTTCTTCTTACTGTTTCGAATATTGTTGGAGTAGTTTTAGTAATTGCA
ATGATGAAGAGTACCCTGCCTAAAGACAAATCGGGCAAAATGAGAATCAGAGCATTTCCT
ATGACTATGGACTCAAAGTATGTAGAAAGCATATGGAGTTTATTAAAGAGTGCAATTCAA
GAAATACAAAAGAAAAACAACTCTGGATTATCTTTTGAAGAATTGTATCGCAATGCCTAT
ACCATGGTTCTGCACAAGTACGGAGAGAGACTGTATACAGGTCTTAAAGAAGTTGTAACT
CAGCATCTGGAAACCAAGGTCCGTGAAGATGTACTCCATTCCCTACACAATGGATTTCTG
CAGACCCTAAATAACGCTTGGACTGACCATCAAACAAGTATGGTTATGATCCGTGATATC
CTCATGTACATGGATAGAGTGTATGTACAGCAGAATGAAGTGGACAATGTTTACAACCTA
GGGTTGATTATATTTAGAGATCAGGTGGTCCGTTATGGTTGTATCCGAGACCATCTTCGC
CAGACCTTGTTGGAGTTGATAGCGCGCGAGCGCAGAGGCGAAGTGGTGGATCGGCTCGCG
ATCCGTAACGCTTGCCAGATGCTAATGGTGCTCGGCATTAACTCACGCGCTGTATACGAA
GAGGACTTTGAAAAACCTTTTCTACATCAATCGTCCGAGTTTTACAGCATGGAGTCTCAA
AAGTTTCTCGGTGAGAACAGCGCCGCGGTGTATATAAACCGCGTGGAGGCTCGCATCACC
GAGGAGGCGGAGCGCGCGCGCCACTACCTCGACGAGTCCACCGAGCCGCGGATCGTGGCG
GTCCTCGAACACGAACTCATCGAGCGGCACATGAAGACTATAGTCGAAATGGAGAACTCT
GGTGTGGTGCACATGCTGACGCACACGCGCACGTCTGAGCTGGCGTGCGTGTACAAGCTG
CTGTCGCGCGTCGCGGACGGACTGCGCACCGTCGCGGACGCAGTGTCGGCGCACCTGCGC
GAGCAGGGCCGTGCGCTAGTCACCGACACGCACCACAACACTAACGCCATCGCATATGTA
CAGAATTTACTCGATCTCAAGGACAGATTCGATCATTTCCTTCAGAACTCGTTTAATAAT
GACAAAATATTCAAGCACATGATAGCGTCTGATTTTGAATATTTTCTAAATTTAAACAAC
AAGTCTCCCGAGTTTCTGTCGTTGTTTATCGATGGAAAACTGAAGAAAGGTGAAAAGGGG
ATGAGCGAACAAGAAATCGAAGCAGTTTTAGATAAAACAATGGTTCTATTTAGATTCCTA
CAAGAGAAGGATGTGTTCGAGAGATATTACAAACAGCATTTAGCCAAGCGATTACTCCTC
AACAAGTCTGTGTCTGATGACAGCGAGAAAAATATGATCTCAAAACTGAAGACCGAGTGC
GGATGTCAGTTCACATCCAAACTGGAAGGCATGTTTAAAGATATGACCGTATCTAATACA
ATAATGGAAGAATTTAAGGAGCATGTCCTATCATCTGGGACGAATCTGTACGGCGTGGAC
CTCTCGGTGCGCGTGCTGACGACCGGGTTCTGGCCGACGCAGAGCGCGACGCCCAAGTGC
AACATACCGTCCGCACCGAGCAACGCGTTTGAAGTCTTCAAGAGCTTCTACTTGGCGAAG
CACTCGGGACGGCAGCTGTCGCTGCAGCCGCAACTCGGTAGCGCGGACCTGCACGCGACG
TTCCGCGGCGGCACCGGCCTCTCCCCGCCCCGCTCGCCCCCGCCGC
(1966 bp)

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