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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c12015_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		periodic_tryptophan_protein_2_homolog_[Helicoverpa_armigera]
Ontology
GO:0000028 P ribosomal small subunit assembly
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030515 F snoRNA binding
GO:0032040 C small-subunit processome
GO:0034388 C Pwp2p-containing subcomplex of 90S preribosome
GO:0044822 F RNA binding
Transcript
Level		FPKM:44.20 TPM:42.81
ORF EntryO_SariASG1259_complete:A_SariASG_c12015_g1_i1
Sequence
(Nucleotide)
TGTGCTCTTCCGATCTGTTTCATTGTTTTTGCTTAGCACGTAAAAACAAAAATTATGAAA
ATAAAATAAATAAATATAAAGCGCAGCAGAAAAGTAATCATTGAAATATATATTTTAGAT
TAAAACATTATAAAATGAAGTTTCACTATAAGTTCCAAAACTTATTTGGCACCGTATACC
GTAAAGGAGACGTACTCTTCACTAAAGATGGGAATAGTGTCATTAGCCCTGTGGGGAATA
GAATAACTGTGTATGACTTGAAAAGAAATAAAAGCAACACTCTATCATTTGAAAGCATTT
ATAACTACACAGCAATGGACTTATCTCCAAATGGTACTACACTGTTGGCAGTTAATGAGA
AGGGTGAAGCACAAATAATAAGTCTAATAACTTGCACTGTAATACATAGATATAAATTTA
AGCAAGAGGTGAATGCTGTGAAATTCAGTCCAGATGGGAAATACTTTGCAGCTTGCTGTG
ATGACACAGTATTTATAATGACTGCACCATGTTCATTCACGGGAGAGTTTCGGTCCTTCA
TCATGAAACGAGTGTATAAAAAAGCCCATGATGATGTCACATGCCTCGACTGGTCAACAT
GCTCCAAGTTACTTGCAGTCGGCTCAAAAGACACCACAACAAAGATATACACAGTAGATT
ATCTGGATAATTTGAATATGTACTCTCTAAGTGGTCATATGGACAAAATAGAAGGAGTTT
TCTTCGAGAAGAAAAGCTTAGATCTTATCACCGTCAGTAGAAATGGTCAGGTGTGTCTTT
GGGAAGCTAATATTGATTCAGATGATTTGGTAGTGTCGGAAGTGCAGATATCGAAGAGTA
AAAAGAAAAGAATGCAGAAGGAAGAAGATAGTGAAGATGAAGTTAACGAAGCTGATGCAA
TAGAAAAGGACAAGGAATATGATAGTGATAAGGAAGAGGAACAGTCCAAAGTTGAAGTCA
AATCTGACGACGAAAAACGTTTACTTTATAAAAAGTTGGGTCGACATTACATAGGTGACG
CTATACGAATGGCCGATAGGAAAGTTAAGCTTACAGCGGCACAGTATCATAAAGATACTA
AATTGTTAGTAACAGGTTTCTCAAACGGTATATTCTTCTTACATGAAATGCCCGATGTCA
ATTTAATACATACTCTGAGTATATCGGAGCATAGGATAAGCAGTATTTCGATATCATCGC
CTGGTGACTGGATAGCATTCGGCTGCCCCAATATTGGACAGTTGCTGGTCTGGGAGTGGC
AAAGCGAGCAGTACGTTCTCAAGCAGCAGGGCCACTCGTTGGATATGACCTGCCTGACTT
ACTCCCCCGATGGACTATACATTGTGACCGGCGGTTACGATGGTAAAGTGAAAGTGTGGA
ACACCATGACCGGCTTCTGTTTCGTCACCTTCAACGAGCACAAGTCGACGGTCACCAGTA
TAGTATTCAGTACGAATAAGAAGTTCTTCGTATCCTCATCGTTGGACGGCACTGTCCGGT
GTTACGATTTGACGAGGTATCGTAACTTCCGTACGTTGACGTCACCGAGCCTGGTCCAGT
TCAGCTGCGTGGCTCTGGACTCGAGCAGCGAGCTGTGCGCCGCCGGTGGTCAGGACGTCT
TCGAGATCTTCATCTGGTCCGTTAAGTTCGGTAAACTCTTGGACGTGTTGGGTGGTCACG
AAGCACCGGTATCGTGCCTGTCGTTCAGCCCGACCCTGGCCAGTTCCAAGCTGGCATCGG
CCAGCTGGGACCGAACGGTCAAGCTGTGGGACTGCATCGAGAGCGGTGCTGAATGTGAAA
CCGTACAGCTCGCCTCGGACTGCCTCCAGGTCGTGTTCAGGCCGGACGGGGAAGAGGTAG
CAGTGTCTACGTTGGACGGTAACATAACGTTCTTCAACGCGACCACTTGCGACCAGACCG
GCTCTATAGAGGGCAGGAACGACCTGGGCTCAGGGAGAGCTGACACCGACCTGATCACAC
CGCAGAAGATGCTCAAGACCAAGGCTTTCACGACTATATGTTATTCAGCCGACGGTTCCT
GTATTTTGGGTGGCGGTAACTCTAAACATGTCTGCCTCTACAGCGTCAAGGATTCGATTC
TGATCAAGAAGTTTGTCATAACTCAGAACAGATCGTTGGATGCTGTTAACGATTTTATAA
ATCGTCGCCTGTTGAGTGAGTTCGGTAACATGGCGCTGGTGGAACAGCGCGAGGACCTGG
AAGGTGGGGATGTGAACATCCGTCTGCCGGGAGTCAAGGAGGGGGACATGGCCGACAGGA
GGGTTAAACCCGAGGTGAGAGTGCACTGCATAAGGTTTTCCCCGACTGGCGAAAGTTTCG
CCGTCGCCACGACAGAGGGGCTGCTCGTTTACAGCCAGAACGCCGGCATCGACGGCACTT
TCAGGCCATACCGTTTGGAGAGTAGTTCTACTCCGTATGGTGTTAGGAAACTGCTGAAGG
AAGCCAGCTGGGGGTCCGCTTTAGTTGGAGCTTTGCAGCTGAACGAGCACTCCCTCATCC
AGGAGTGCGTCGAAGCGGTTCCTCCATCAGATATTGTCCTGACGGTGTCCGGGCTGGGGG
AGGACTACAGGGATCGGCTGCTGGGCACTCTGTCTAGACTTCTAGAAGATAGCAGGCACC
TGGAGCACCTGCTGCTGTGGGTCAAGACGATCGTCTCTTTGAAGAGCCACAGGTTCCCGG
GAAACGTACTTCTGGCGTTGGAGAAAGTGCTCACGGTGAAGCACACGCAGCTGAGTAAAA
TATGCGATTTTAATAAATACACAATAAGATGTATTAAAACCGTCGGGGAGATGAACCCTA
AAGAAGAAATCGAAGAGATGGACACCGACCACGATTCCAGTGGACGCGGAACATTCTCTG
ATACCGATTGACTTGTTAATTAAATAAACTGT
(2912 bp)

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