SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c11063_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		proteasome_(prosome,_macropain)_subunit,_alpha_type_6,_isoform_CRA_a,_partial_[Mus_musculus]
Ontology
GO:0000502 C proteasome complex
GO:0000932 C P-body
GO:0002479 P antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0003723 F RNA binding
GO:0004175 F endopeptidase activity
GO:0004298 F threonine-type endopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005839 C proteasome core complex
GO:0005844 C polysome
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007519 P skeletal muscle tissue development
GO:0008233 F peptidase activity
GO:0016363 C nuclear matrix
GO:0016787 F hydrolase activity
GO:0019773 C proteasome core complex, alpha-subunit complex
GO:0030016 C myofibril
GO:0030017 C sarcomere
GO:0051059 F NF-kappaB binding
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0051603 P proteolysis involved in cellular protein catabolic process
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:2.01 TPM:1.95
ORF Entry
Sequence
(Nucleotide)
AGAATATGCTTTTAAGGCTATTAACCAGGGTGGACTTACATCTGTTGCTGTCAGAGGAAA
GGACTGTGCAGTTATTGTCACACAGAAGAAAGTACCCGACAAACTACTGGATTCCAGCAC
AGTGACTCACTTGTTCAAGATAACGGAAAGCATTGGCTGTGTGATGACAGGAATGACAGC
TGACAGCAGATCCCAGGTACAGAGGGCACGCTATGAGGC
(219 bp)

- SilkBase 1999-2023 -