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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp37575_c0_seq9
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_TRIP12_isoform_X1_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:1901315 P negative regulation of histone H2A K63-linked ubiquitination
GO:2000780 P negative regulation of double-strand break repair
Transcript
Level		FPKM:3.97 TPM:2.92
ORF EntryO_ErmoMG18113_internal:A_ErmoMG_comp37575_c0_seq9
Sequence
(Nucleotide)
CAACTGAACCCAACAGTACTACAGAGGGTAGAACCATCTCACCTCCACCATATAAAGATC
TTCAAGAAGCAAGTTCATCAAAAGCGCAGAACAGTGGAAGTAAATTACTGATTGTTCCAC
GTGACCTGCCGTATCTACGTCAAACTAACGCTCGGAGGAGTATTGCAGCTGCGACGGGGG
CTACTCTGGGAGCTTGCTTGACGCGGGGAGCTTCAAGCACTCAACGACAGAGGCAGGAAA
CGGCATCAAAGAGACAGGTAGCGACCGAGGCCGCGGCCAGTAGCAGCGCGGCGGCGGCGG
GACGGCGGGCGCGTGCTCGCGACATGCCGCAGCCGCATCCACCCTCTACACGGAAAGAAA
AACGAGGCAAAACCAGTCTGGGTTCGTGTGCCAGCACTGGTGCTGCGACCAGCCGCTCCC
ACGCTCAGCCTCTAACCACGGGTGCCATAGCATCAACTTCGACCACACCGCCAGTGCAAG
CCGCAGCAGTCTCGATGCCGGATAATGCTGCAAACGACGTCAAACCTAAAGGTATGTCGT
CTGCTGAAGAGTGCGGTGTGGGGGGCGGCGGCGCGGCGCTGGGCGAAGAGTCCTCGTCGG
AGGAGGGCGAGGTGGGGCGGCTGCAGGCGCTATTGGAGGCGCGCGGGTTGCCGCCGCACC
TGCTGGGCGCGCTCGGACCGCGCATGCAGCATCTACTGCACAGGACCGTCACTGCCAACT
CTGCCGCATCTAAGGCAGCTCAGTTGCTCGCCGGACTCCAGGCAACCGGCGATGAAGGGC
AACAACTGCAAGCTGTTATCGAAATGTGCCAACTGCTCGTGATGGGCAATGAAGACACGC
TCGCCGGATTTCCTGTTCGACAAGTCGTTCCAGCTCTCGTTAATTTACTAGCTGCTGAAC
ACAACTTTGATATGATGAACCACGCGTGTCGCGCGCTGACGTACATGCTGGAGGCCCTCC
CGCGCAGCAGCGGCGCCGTGGCGCTGGCCGTGCCCGCCTTCCTCGACAAGCTGCAGGCCA
TCACCTGCATGGACGTCGCCGAGCAGAGCCTCACCGCGCTCGACATGCTCTCGCGACGAC
ACGCCAAGGCCATCCTGCAAGCCCGAGGTGTATCAGCTTGCTTGACATATCTGGATTTCT
TCTCTATCAATGCTCAACGTGCAGCACTCTCCATTACTGCCAATTGTTGTCAAAATCTCA
CTGCAGATGAGTTCCATCTTGTCAGAGAATCACTACAACTACTTGCTAATAGACTGACCC
AACAAGATAAGAAATCCGTTGAATGCGTTTGTCTCGCGTTCTCCCGGCTCGTGGATAGCT
TCCAGCACGATCCGACGCGTCTTCAGGAGATTGCTACTCCAGAGCTGCTTACCAATCTTC
AGCAACTTTTGGTGGTGCAGCCGCCGCTGATATCGGGTGCGACGTTCATCACGGTGCTGC
GCCTGCTGTGGGTGATGTGCGCGGCGTGCCCGCAGCTCGCCCTGGCGCTGCACCAGCGCT
CCATCGCAGACACGCTGCTGTGTCTGCTCACCGGCTCCACGCTACATCAGGAGCAAGTGG
AGTTGATACCGCGCCTACCGCAAGAGTTGTACGAGATCACGTGCCTCATCGGTGAGCTGA
TGCCGCGCCTGCCCACGGACGGGATATTCTCGGTGGACGCGCACCTCGACCGGCCCTGGT
CCGCCGTCTCCGAGCGGACGCCGCACTGGCAGTGGCGAGACGACAGAGGTGTATGGCGTT
CGTATTCATGGGCAGAAAGCCGTGCTCTGGAAGCAGGTATGGCGGCGGGCGAGGAGGAGG
TGTGCCTGAGCACGCTGGGCCGCTCCTACACCGTCGACCTCACCGCCATGCAGCAGCTCA
ACGAGCACACCGGCACCGCGCGCCCCGTGCAGCGCCTCGCGCCGCCGCAGCAGACGCAAG
CCGCCGCCGCAGCCGCCGCGCCAGATCCCCGTATAAGCATGGTGCGTTCGAATCCGTCGT
TGATCCGCGCGCTGCTCGCCGTCCTGCACGAGGTGTACTGGAGCTCGGCGGGGCCGGCCT
TGCGCTCGCAGGCACTCAAGGCTATACTGCGCTGTGTGTACTACGCTGACGCACCCTTAC
TACGACAAGTGCTCAAGATGCAGGTGATATCATCTCACATAGCGGGCATGATGGCATCGA
GCGACCTGCGCATAGTGGTGGGTTCGTTGCAGCTGGCAGAGATCCTGATGCAGCGTCTGC
CGGAAGAGATGGCGGCTCAGTTCCGTCGCGAGGGCGTGCTGCACCAGATCGCACAGCTCG
CCGCAACGCACGCCGCCGCGCACGCCACCACGCACGCCACCGCGCAAGCAGCAACACACA
ACCAACAAAAGTCTCCCAGCGGTCCTAGCACTCGTTCCAGCGGAGGAGCATCTCCTCCAA
CATCATCGACGGCATCAATAGAACAAAATAATCTATCTATGGCCTTCTCTGCATCTGGTT
CGTTTGTGGCCACTTCTCTGCCGAGCAGCAGTGATGTGAGCGGATCCGAACCTGGTCCTG
CGTCAGCTTCTACCCATCCCCAGTTACCCACTGCAGTGCACAGGTTAATTTCAAGCCAAA
TTTACATGTCTGGTAGTCCTCTGCAGCTGGCCGAGATGTTAAAGCGTAAGCGCGCGATCA
AACGTAGCGGCGCGACGGGCGGACGGCACGCCAGGCGCAGGGACGACGCCGCGCCCGCCG
CACACCACGCGCCCTCACCTCACGGAGCTAGCAGCTCCGGTGGCGGTCGTAGTTCTGCCG
GGCGTCCCAGCGGTGCGTCCAAGACTGCATCGTTCCTATCATCGCTGAACCCGTCGCGTT
GGGGACGGGCGCCGCATCAACACAAGGACACTGCGCTTCTCGCCTCGCCTCATGCAACTG
CCAATCTTACTGTGCAGAACAAAGAGAAGGTCCGCGAGTGGATATCGTGGTCGGCGCGTC
GCCTGCGCTGCGAGTGGGGCGCGCTGGGCGGCGGGGCGGGCGCGCTGGAGCAGCTGGGTG
(3000 bp)

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