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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp37575_c0_seq5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_TRIP12_isoform_X1_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:1901315 P negative regulation of histone H2A K63-linked ubiquitination
GO:2000780 P negative regulation of double-strand break repair
Transcript
Level		FPKM:0.58 TPM:0.43
ORF EntryO_ErmoMG18101_internal:A_ErmoMG_comp37575_c0_seq5
Sequence
(Nucleotide)
AACTAACCAAAGTACCACAGCAACACAAGTACAACCAAACAGCTCTGAAGGTGGCTTATT
ACCTTTAGACGAAAGAGATTTTGCATATTCACCGTTTAGTTCATCAACCGTCACAGATCT
TATTGATTCGGACTATTCAGTGTACAGTCCTACAGCAAGTCGTCGAAAAGGCAAAAAGCG
AAAACGATCACAACATCGTTCTTTGTCTAGCCGAAAGAATAGTTATTTGGCAGGTATTGA
AGATTACAAGAAAAAGGTAAAAATAGAGCCTTTAGATTCAACCGATCCTGTCAATAATAA
AACTTCTAAGAACGAACCAGAGAAAGCAGACAATACTGCAGCACAAACTCCTTGTACATA
TTTGTTGCGAAATAGACACAATCGTGACCTTGGACCACCCACCTCTACAGTCATTAGTGA
AAACGCAGAAGCAAGTTCATCAAAAGCGCAGAACAGTGGAAGTAAATTACTGATTGTTCC
ACGTGACCTGCCGTATCTACGTCAAACTAACGCTCGGAGGAGTATTGCAGCTGCGACGGG
GGCTACTCTGGGAGCTTGCTTGACGCGGGGAGCTTCAAGCACTCAACGACAGAGGCAGGA
AACGGCATCAAAGAGACAGGTAGCGACCGAGGCCGCGGCCAGTAGCAGCGCGGCGGCGGC
GGGACGGCGGGCGCGTGCTCGCGACATGCCGCAGCCGCATCCACCCTCTACACGGAAAGA
AAAACGAGGCAAAACCAGTCTGGGTTCGTGTGCCAGCACTGGTGCTGCGACCAGCCGCTC
CCACGCTCAGCCTCTAACCACGGGTGCCATAGCATCAACTTCGACCACACCGCCAGTGCA
AGCCGCAGCAGTCTCGATGCCGGATAATGCTGCAAACGACGTCAAACCTAAAGGTATGTC
GTCTGCTGAAGAGTGCGGTGTGGGGGGCGGCGGCGCGGCGCTGGGCGAAGAGTCCTCGTC
GGAGGAGGGCGAGGTGGGGCGGCTGCAGGCGCTATTGGAGGCGCGCGGGTTGCCGCCGCA
CCTGCTGGGCGCGCTCGGACCGCGCATGCAGCATCTACTGCACAGGACCGTCACTGCCAA
CTCTGCCGCATCTAAGGCAGCTCAGTTGCTCGCCGGACTCCAGGCAACCGGCGATGAAGG
GCAACAACTGCAAGCTGTTATCGAAATGTGCCAACTGCTCGTGATGGGCAATGAAGACAC
GCTCGCCGGATTTCCTGTTCGACAAGTCGTTCCAGCTCTCGTTAATTTACTAGCTGCTGA
ACACAACTTTGATATGATGAACCACGCGTGTCGCGCGCTGACGTACATGCTGGAGGCCCT
CCCGCGCAGCAGCGGCGCCGTGGCGCTGGCCGTGCCCGCCTTCCTCGACAAGCTGCAGGC
CATCACCTGCATGGACGTCGCCGAGCAGAGCCTCACCGCGCTCGACATGCTCTCGCGACG
ACACGCCAAGGCCATCCTGCAAGCCCGAGGTGTATCAGCTTGCTTGACATATCTGGATTT
CTTCTCTATCAATGCTCAACGTGCAGCACTCTCCATTACTGCCAATTGTTGTCAAAATCT
CACTGCAGATGAGTTCCATCTTGTCAGAGAATCACTACAACTACTTGCTAATAGACTGAC
CCAACAAGATAAGAAATCCGTTGAATGCGTTTGTCTCGCGTTCTCCCGGCTCGTGGATAG
CTTCCAGCACGATCCGACGCGTCTTCAGGAGATTGCTACTCCAGAGCTGCTTACCAATCT
TCAGCAACTTTTGGTGGTGCAGCCGCCGCTGATATCGGGTGCGACGTTCATCACGGTGCT
GCGCCTGCTGTGGGTGATGTGCGCGGCGTGCCCGCAGCTCGCCCTGGCGCTGCACCAGCG
CTCCATCGCAGACACGCTGCTGTGTCTGCTCACCGGCTCCACGCTACATCAGGAGCAAGT
GGAGTTGATACCGCGCCTACCGCAAGAGTTGTACGAGATCACGTGCCTCATCGGTGAGCT
GATGCCGCGCCTGCCCACGGACGGGATATTCTCGGTGGACGCGCACCTCGACCGGCCCTG
GTCCGCCGTCTCCGAGCGGACGCCGCACTGGCAGTGGCGAGACGACAGAGGTGTATGGCG
TTCGTATTCATGGGCAGAAAGCCGTGCTCTGGAAGCAGGTATGGCGGCGGGCGAGGAGGA
GGTGTGCCTGAGCACGCTGGGCCGCTCCTACACCGTCGACCTCACCGCCATGCAGCAGCT
CAACGAGCACACCGGCACCGCGCGCCCCGTGCAGCGCCTCGCGCCGCCGCAGCAGACGCA
AGCCGCCGCCGCAGCCGCCGCGCCAGATCCCCGTATAAGCATGGTGCGTTCGAATCCGTC
GTTGATCCGCGCGCTGCTCGCCGTCCTGCACGAGGTGTACTGGAGCTCGGCGGGGCCGGC
CTTGCGCTCGCAGGCACTCAAGGCTATACTGCGCTGTGTGTACTACGCTGACGCACCCTT
ACTACGACAAGTGCTCAAGATGCAGGTGATATCATCTCACATAGCGGGCATGATGGCATC
GAGCGACCTGCGCATAGTGGTGGGTTCGTTGCAGCTGGCAGAGATCCTGATGCAGCGTCT
GCCGGAAGAGATGGCGGCTCAGTTCCGTCGCGAGGGCGTGCTGCACCAGATCGCACAGCT
CGCCGCAACGCACGCCGCCGCGCACGCCACCACGCACGCCACCGCGCAAGCAGCAACACA
CAACCAACAAAAGTCTCCCAGCGGTCCTAGCACTCGTTCCAGCGGAGGAGCATCTCCTCC
AACATCATCGACGGCATCAATAGAACAAAATAATCTATCTATGGCCTTCTCTGCATCTGG
TTCGTTTGTGGCCACTTCTCTGCCGAGCAGCAGTGATGTGAGCGGATCCGAACCTGGTCC
TGCGTCAGCTTCTACCCATCCCCAGTTACCCACTGCAGTGCACAGGTCTGGTAGTCCTCT
GCAGCTGGCCGAGATGTTAAAGCGTAAGCGCGCGATCAAACGTAGCGGCGCGACGGGCGG
ACGGCACGCCAGGCGCAGGGACGACGCCGCGCCCGCCGCACACCACGCGCCCTCACCTCA
CGGAGCTAGCAGCTCCGGTGGCGGTCGTAGTTCTGCCGGGCGTCCCAGCGGTGCGTCCAA
GACTGCATCGTTCCTATCATCGCTGAACCCGTCGCGTTGGGGACGGGCGCCGCATCAACA
CAAGGACACTGCGCTTCTCGCCTCGCCTCATGCAACTGCCAATCTTACTGTGCAGAACAA
AGAGAAGGTCCGCGAGTGGATATCGTGGTCGGCGCGTCGCCTGCGCTGCGAGTGGGGCGC
GCTGGGCGGCGGGGCGGGCGCGCTGGAGCAGCTGGGTG
(3338 bp)

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