SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp37552_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA_polymerase_II_elongation_factor_Ell_[Bombyx_mori]
Ontology
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0008023 C transcription elongation factor complex
GO:0015979 P photosynthesis
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035327 C euchromatin
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0043620 P regulation of DNA-templated transcription in response to stress
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0070063 F RNA polymerase binding
Transcript
Level		FPKM:5.69 TPM:4.18
ORF EntryO_ErmoMG17934_3prime_partial:A_ErmoMG_comp37552_c1_seq1
Sequence
(Nucleotide)
GCAGACTGAAGAGCGCTGCCAACAAAGGCCGAGTCGATGGGGTTACAAAAAGATTGTTAA
TTTGGACATCTAAACCCTTTTGTTGTTGTAATTATAATTTTATATAGGTTGTGAATCTGT
GATTACGTTAAGAAATGTGTGTATGATATGAATTGTGGCGACTAGCAAAGGAGTCAGCTG
GTCCACAGTGCGAATAGTGAATAAGAAATGGCGGCCTTGCCAGCAGGTGTTCAGTATCCG
TTATCATCGGAGTCTAGTTATAAAGAAAACAAGGAACTAGTGTTTGTGAAATTAACGGAT
TCTGCGCTTAAAGCCATAGAAGATTTTCTTAGAAATAACAAGGACAGATTAGCTAAACCT
AAAATACAGTTCCTACCCGGAAATGAAGGGAAAATCTCCATTCCGACTCTTACCAGTGGC
AATGGATCGTCGGGCGAAGCTACATTTCGCTTCAGCATCAATAGTAATTCAGAAATGGAA
GGTCCACAGGGTGCGTTCGAATGCGTTAGGAGCGGTGGGGCGCGGCGTTTGGAGTCGTGC
GGGCCGCTACCGCGAAGAATGCGCGTTCAAGCGAATGACGACTCATACGAGGCCACGAAA
GACCGAATGGCGAAAACAGTGGCTGCGGAGCAAAGTAAATGCACCCGCGTGATAAAACCT
AATCTACCGGACATCGGGAGGCGCGTCAAAGTGCGACACTCGTATGCGTCAAATAATGCC
GCAGCTCAGGTCGCCGAGCGGATCGATCGAACCGACCGGCCCGAGCGACCTGAGCGATCG
GACAGGCCCGACCGGGCTGACCGTGCGGATCGAGCCGACCGCCCAGATCGGGCTGACCGC
CCAGATCGGGCTGACCGTCCGGATCGGGTTGACCGTCCGGACAGGGCTGACCGTCCGGAT
CGGGCCGATCGTCCGGAGCGTGTGGACCGTGTGGAGCGGCCGCAAGTGACGGCCAACGTT
CCTCGTCCTCAGCCCGCGCCCACGCAACCGCACCAGCCGCCTCCACACCAAGCGACGCAT
CATCAGCGTCCGCCACCTAACCCTGATCTCACTAGGAGATCGTTGAAAGAAAGACTTATA
CAATTATTAGCATTGAAACCGTTCAAGAAACCCGAATTGTATTCTAGATTATCCAGTGAG
GGAATCAAGGATAAAGAAAGAAGTGCCGTGAACAAGATACTACCACAGATTAGTTCGTTA
AAGGACAACTGTTACCATTTACGTAGACACATTTGGAACGACGTCAACGAAGATTGGCCG
TTCTATTCTGAAGAGGAGAAACGTATGCTCAAGAGGCGGAAACCTCAAAACTTAACCCCC
CCGCTGAGTAGTGACTCTGCTCAGTCGCTGTCACCGCGCGCGTCCCCGGGCGGCAAGCGT
GCGGCGGCGGCGGCAGGATCTGCCGCGCCCGGGGACGAGCCGCCCGCCGCCAAGAAGCAG
CGCATCTCACACTACCAGCGCCGGCCCTCGCCCCCCTCCTCGGGGTACGCCACCACCTCC
TCCGGGGAGCGGCACGCCTCCGATAACGAGGACGAGAGGCCGACGGCGCAAGTTAAAAAG
GACAATGGTTACACCCTTAACTTTACAACGGTCAAGGAAAT
(1601 bp)

- SilkBase 1999-2023 -