SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp37528_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_spinster_isoform_X1_[Amyelois_transitella]
Ontology
GO:0003376 P sphingosine-1-phosphate receptor signaling pathway
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0007040 P lysosome organization
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0007619 P courtship behavior
GO:0008333 P endosome to lysosome transport
GO:0008347 P glial cell migration
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0009267 P cellular response to starvation
GO:0010001 P glial cell differentiation
GO:0012501 P programmed cell death
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030154 P cell differentiation
GO:0031902 C late endosome membrane
GO:0031982 C vesicle
GO:0035193 P larval central nervous system remodeling
GO:0040011 P locomotion
GO:0043067 P regulation of programmed cell death
GO:0045476 P nurse cell apoptotic process
GO:0045477 P regulation of nurse cell apoptotic process
GO:0045924 P regulation of female receptivity
GO:0046624 F sphingolipid transporter activity
GO:0048477 P oogenesis
GO:0048488 P synaptic vesicle endocytosis
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0055085 P transmembrane transport
GO:0090099 P negative regulation of BMP signaling pathway
Transcript
Level		FPKM:10.20 TPM:7.50
ORF EntryO_ErmoMG17826_complete:A_ErmoMG_comp37528_c0_seq2
Sequence
(Nucleotide)
TTGAAAAATAATTATTTTTTATTTCAATTCCATGATGAAACTTTATGCCGTATATATGTA
CAACGAACATGTTTAAGTAGATAATAATTTAGACGTACATAAAATTTATTCAGTCTTATT
GAATTCTGTACAGTTTAATCTAACATGTTTCTAATATTTATCATAAACTACAACAAACTT
ACAATAATATTTTAATTCGTAAACAGCACTCCTTTTGTTTAAAAATAAAAGGTAGGGTGT
TACAATTTATTTTGTTTAGCTACAACTATTGGAGGTCGTGTCTATAATTTAGGAACTGAG
TCAAAGTTAGATAAACCGTACCAATATTCTCGTATGCAAACTTATTCAAACTATGAAAAA
CTCAACCGTGATGAATACTATTAAATATTAAGATTTTATACTATGAAAGGCATCATTACT
ACCCCAATAATCTGGAAGTATAAAATAATTTATAGGAATATTCGAGATAATACTCAACAA
TAACAGCCATAATTTAACTATGATTCTATTATAAATATCTATCTGTTCTTGTTAGGCACA
ATTTATTTTAAATCTAATTAAGAAATACGATTTACCGATTTCTATACTAAGCTTTAAAAT
TTAATCCACACGAAACATTTATACCAACATTATAATCAATCCCGCCATTGTTCAGCAATA
TGCTTAACAAATCAGTCTTCTTAATGATGCAACAGGAAAGTAACCATGTTCTTCTTGTTC
CAGTTTCGTTATAATTCAAATGCTAGATTAGTATCACTTCAAAATACTTAGTATTTAAAT
TAAATCCAATGAAAAACGTGGCTACTTAACTGAAACAACCAATGCTCTTCGTATGTGAAA
GTCTAAAATTCTCTCACCATTTATTAATGACCGACTTTTAAATATGATTTATTTTAATTT
TATTCTCCGTCTACGATCTCTTCATGTGCTGAACTGTGCGATGGTTCCCGCCGTGTTTCG
GCTTCTGCAATAGCTCTATCGACTTTTTGTTTGTCTTTGACGATGTATGCTGATGTTATT
AGAAAGAATATTCCTCCGAGTACTTCGACGAAGCACGTTATGAACAGCGCGTACTGAAGT
GCTCTGAATTCAACCGTTTTACTGGGTGGAAGATTGTCTGGCGCTAGATACGATTTCAAA
CTCTCAGATATAACTCCGACTAAATAAGGACTGCCAGCGTCGCCAAACATGTGAGAAATT
AATATCTGAAAAGCTTCTGCCGTCGATCTTCTTGGAGGTATTACCACGTACAGCGACATG
TCGGCCACGATTGCCCAGTTGATGTTGATGAAGAGCTCTCCCACAAACATGAGCGCGAAC
GGTATCTTCGTGTAACCCTCCGTCAGCACCAGCGCCAGCGACAGCACCGGCGCCGACAGC
AGCAGCCCCGCGCCGCACAGCACCGGGTGCGCTCGGCCCCACACGCGCACCAACGCGCCG
CCCAGCCACGCTCCCAGCGCCACGCCGCCCATCCCCGACACCATCGTCAGCGCGCCGAAC
GTTAGCGACACCGTTTCTGGGGTGAACGTATTGTTAGGCTGCAAGTCGAGTCCCGAGAAG
ATGAACTTAGGTCCCCACCAGGTGAGCGCGCCCGTCACGAACGCTACGCACGTAAATGCG
ATCGTCGACAACATAAACGATGGATTCTTTACAAGAGAACGAATGTCGTCTTTATAGGAT
GTGGGTTTTATCTGACTGTCTTCCGAGGCACCTCGTTCAGGGTCTTCCATTGCCCATAGT
ATTAAGGCTACGGCAACGGCACCAAAGAAAGGCGTCACCCGCAACCCATACCGCCAATTG
TCCAGAGCTCCGCCCACCACTGAACCCACTATATATCCGAGGCCACTTCCAACTGGGATC
GCAAAATAGAAGAATGCTAACATCTTTGATCGTACATCTCCCACGAAGAGATCGCTGATG
ATGGTGGGAGCTATGGTGGAGTACGAGGCTTCTCCGATTCCAACGAGACCGCGGAAGAAT
GCAAAAGACTCGTAATTAGGTAAAAAGGAGCCGATGAATGTTGTTATACTCCAGAGGGCA
ACACCGCTTGCCATAATGGTACGCCTTGAGTATCTGTCACCTAAATACCCGAATATAGGT
GCGAACAACATGTAGGCCACCACGAACACCGTCTGCAAGAAACCAGCCTTGCCATCTCCG
ATGTCGAATTCGCTTTGAACCTCTTTTAAAACACCGGCGATGGTCAATCGGTCCATGTAG
TTGATGAGGTTAACGAAGCACAATACACAGACAGTCATGTATTGCGAGAAGGTCACGTCC
CTTAGGCTAGTATGTTTTCTCGCCTGTTTTTCTTGCAGAAGTGCTGTTGCAGATTCATTA
TCACCATTTATAACTAACTGCTGATTCGAAGTGTTCGGTGTAATACCACTGGGGTCCATG
ATTCCTGAACTATTACAGGAAAGCGACTTTCAGAAATTTTGAATCGCGATAGTTAAGAAC
TTTTTAGGCAAATTATTATTTGAATCAAAATTTAAAACAAATAGTAGAAATACATATGTC
CTATCATTGATTTTCT
(2536 bp)

- SilkBase 1999-2023 -