SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp37488_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_talin-1_[Bombyx_mori]
Ontology
GO:0001726 C ruffle
GO:0003779 F actin binding
GO:0005178 F integrin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007044 P cell-substrate junction assembly
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0030274 F LIM domain binding
GO:0030866 P cortical actin cytoskeleton organization
GO:0032403 F protein-containing complex binding
GO:0032587 C ruffle membrane
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
Transcript
Level		FPKM:4.22 TPM:3.10
ORF EntryO_ErmoMG17597_5prime_partial:A_ErmoMG_comp37488_c0_seq1
Sequence
(Nucleotide)
CGCGGCTGGTGGCGGCGGCCGCGCACTCGCTGGTGGAGGCGGCCAACGCGCTGGTGCAGG
GCGCCGCCACCGAGGAGCGGCTCATCTCCAGCGCCAGGCAGGTCGCCTCCTCCACCGCGC
ATCTGCTCGTCGCCTGCAAGGTGAAGGCGGACCCGGGCGCGGAGAGCACGCGGCGGCTGC
AGGCGGCGGGCGCGGAGGTGATCCGCTCCACCGACAACCTGGTGCGGGCCGCGCGCGACG
CCATCACCTGCGACGACGAGCGCAGCCTCGTGCTCAACCGCCGCATGGTGGGCGGCATCG
CGCAGGAGATCGACGCCAGGTCGGAGGTGCTCCGCATAGAGAAGGAGCTGGAGGAGGCGC
GCGGGCGGCTGACGGCCATCAGGCAGGCCAAGTACAAGCTGCGGACGGACACGGACGAGT
CCGACGCGGAGCAGCTCGGGTACAGCAGCGACGCGTCCGCCCCGCACAGGATGCGAACCC
CGAACAGCAGTTTCGCGAACACGACTTACAGCCCCAACAGCACGTTCCACTCCACACACA
ACAACACCTCCCTGTTGCAGACAACGCACAACACGTACGGACACAACTCCACCACCTCCA
CGTACGGACAGAACAACAGTACAAGTCCGGTGCCCCCCACGGAGCGGGTGCAGCCCCCCA
GCCCCTCCTTCTCCAGCTTCAGGCCCCCGCCCGAGACCCCCAAACAGAACTACGAAGCCT
TCACTACTCGCACGAGCACCGAGGAGGGTGTGCTAGTGACGCAGCTCCGCCTCCCCGAGG
TCCGTAGTGCCTTGCTCGTCGAAGGGCCCCCTAACGACACGGTATATTACAAGCGGGAGA
GGCCCCCGCCGCCGCCACCCAGGAGGATAACCCTAAAGTACGAAGACAACGCTAGTTAAA
TTGGTTACGAAACACGAATGTATGACACGCCACGACCCGTTAACGACTATAACACACACA
CGAGCGAGCGACAGGAGAGTCAGTACCAATACAAACAGGAGAAATACGATTATGAAGCTC
CCAAAACACCTTTGAGTCCGAAATTCAACGCTAGAGACTTGAAATTTGATGACAAACCAG
AACCCATATACTCCACGTTGAAGAAACCTTCCGACGGGATAGGACAGACGTTCTCTGAGC
ACCAGAAGTCTACAGAATCCATCCCTGGGGGTACTAAGCATTCGGAATACTCAGTCAAAA
GTGAATCTTACCAGTCTTACCCTAAGACTGAGTTCTCCAAAACAGAATACCGGCAGGAAG
TCAAATCCCCTTTCACATCGACTCCGAAGTTTGACAGGACTGAGTTCTCCAAAACAGAAT
ACCGGCAGGAAGTCAAATCCCCTTTCACATCGACTCCGAAGTTTGACAG
(1369 bp)

- SilkBase 1999-2023 -