SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp37473_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_succinate_dehydrogenase_[ubiquinone]_iron-sulfur_subunit,_mitochondrial_[Papilio_xuthus]
Ontology
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005749 C mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
GO:0005875 C microtubule associated complex
GO:0006099 P tricarboxylic acid cycle
GO:0006121 P mitochondrial electron transport, succinate to ubiquinone
GO:0008177 F succinate dehydrogenase (ubiquinone) activity
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0048039 F ubiquinone binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0051538 F 3 iron, 4 sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
Transcript
Level		FPKM:25.11 TPM:18.47
ORF EntryO_ErmoMG17451_complete:A_ErmoMG_comp37473_c0_seq2
Sequence
(Nucleotide)
AAAAAAATCCTTGTTTCTTGCTATTTATCGACTCGAATTTAATTTACAAAACAAACTTAC
GAACGCCAATATTAAACGATTCCGCCAGACCGTGAACTTCACGAGTCTTGACTACTAACG
AAGTGTAAATAATTTTCGTTGTTTGTGATTTTTAACATTACATAATGCCGTTCCTCAGGC
TGACTAGTGGTACTTTTGGGCAGCTGCGTACGTTTGCGACGTCAGCAGCCCTAGGAAAAC
GCGTGAAGACCTTCGCTGTGTACCGGTGGAACCCGGACGAGCCTGACAAGAAGCCTACTA
CGCAGAACTTTGAAGTTGATTTAGACGACTGCGCTCCCATGGTGTTGGACGCGCTATTGA
AGATCAAAAATGAAATGGATCCGACCCTGACCTTCAGGCGTTCGTGCCGTGAAGGTGTAT
GCGGCTCTTGCGCAATGAACATCGACGGTGTCAACACTCTAGCTTGCATCAGTCATATCG
ACCAAAACCTGTCTAAGCCTACGAAGATTTACCCCTTACCGCACATGTACGTTGTTAAGG
ACCTGGTTCCCGACCTTACCAACTTTTACCGTCAGTACCAGTCCATCGAGCCGTGGCTGC
AGCGCGAGCAGGAAGCTGCTAAGGGTAAAGAAACCCAGTTGCTGCAGGATGTAGAGGACC
GCGCGAAATTAGACGGTCTTTACGAGTGTGTGCTGTGTGCCTGCTGCTCGACCAGCTGCC
CATCATACTGGTGGAACGGAGACAAGTATCTCGGCCCCGCTGTCCTCATGCAAGCCTACA
GGTGGATCATTGACTCCAGAGATGAGGCAACCGAGAAACGTCTTTCGAAACTTAAGGACA
CATACTCGGTATACCGTTGTCATACCATCATGAACTGCACCCGCACTTGCCCGAAAGGTC
TGAACCCTGGTCGTGCTATTGCCCAGATCAAAACCCTGCTCTCGGGAATGGTAAAGAAGA
ACCCTCCGATTATGGACCCTGCTGGTTTAGAAAAGCAATCTGCCAGTAATTAAACAATGC
TTAAGGTTTATAGCAAATACTGCAGAATCTAGGATAAGGAGTAAGTGAAATGTAAATTAT
GAAATTAACGACATTGCACAAAAATGTAACAATAACATTGATCGTAACAAGAAATTGTAA
TTTAAGAACTTTTTCATTGATAAACATTATCTTAATCTGACAATTATCTTTAAAAAAAAA
TAAAAAATATGACACATGAATTATTACAAAAAAAAAAATATCTCAGAAAAAAAAATGATA
TAATCTATGCATATTTTAATGTAAAGATTTTTTGTACATACCATTTCAGTTTTATATGAA
TCAAATTTGAACCTTAAATGACACTCATTTTGGAGGATAATATGAAAAATGTAAGATCTG
TTATACTACGATATAAATCATGGTATGTAATAAATTTTAAAACAATGTACTTAATGTAGT
CCAATTTTAATATTATTTAAAAATATAGTTCAATCGTTATAAATTATAACTTTGCAATAA
TTTCCATGCTAGTTATTTGTATTAAATTATATTTTACATTCTAGAAACTTCTTTAGAAAC
TCAAACCCTTAACTTTATGATAACTTCAAATCATGACTTCATGATTACACAATATGAAGG
TACAAAAAGGCACAATAAGTACAAAAAAAATTGTAGAACATTTGGATAAGTTCATTATGA
ACAAACAGGCTACTCTATGTAGAAACATTATTTAAATTTTATCCCTTTTGACCTACCATA
AAGACAATTTATATAGAATAGAATGTCGTAACTTTAAATAGATTCCACTTTTGGATATGA
AAAAATGTATTATGGACTTAAATGACATTTATAATGTAAAATATTGTATTGACCATAATA
AGTTTACTTTCTAAATAGGAATAAAAGCTTAAAACAGTATTGACCATTAAATTCAGTTTG
TAGCATAAAAAAAGTAGATAATGTTGAAAAAAATAAGCTTTGGCCTACCAATAAAATGAA
GTATGTGATATACAGTTTTTTATAACATGCTCTTAATGCTTTATATAAAATACAGTAAAT
AAGTATATTGTTGATACTTGATGATGGGCTGATGTCTGCAAGTCAACGTCTTTCATGTGC
CTATTTTGTGTGTGGGTGGGATGTGGGACCCAAGCTCCTCCAGCCAGCCCCTTCGGAGTG
GCGACAGCCTCGGGGAACGTGTGAAGCCCCGTAGTTGGCAACTCCTACGCACTCTACTAC
TATATATATTGTTATCGAATATAAGATTAATAAAATAATTAAAAAGTATTATTTGATGAG
TATTCTGATATATTGCGCTTGCCACTATGTTCACAGTTTCATTTGTTTAGTAAATGTTAT
TTATTTGTATGTACAGCTGTTGGATAAATGTTATTTAATGAAAAAAAAAAAAAAAAAAAA
(2400 bp)

- SilkBase 1999-2023 -