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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp37398_c0_seq11
Scaffold_id
NCBI non-redundant
(nr)		putative_ubiquitin_ligase_E3_alpha_[Danaus_plexippus]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0000785 C chromatin
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006342 P heterochromatin assembly
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007141 P male meiosis I
GO:0007283 P spermatogenesis
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030163 P protein catabolic process
GO:0032007 P negative regulation of TOR signaling
GO:0033522 P histone H2A ubiquitination
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0070728 F leucine binding
GO:0071233 P cellular response to leucine
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
Transcript
Level		FPKM:4.79 TPM:3.52
ORF EntryO_ErmoMG17117_complete:A_ErmoMG_comp37398_c0_seq11
Sequence
(Nucleotide)
CAGAACTCAAGAAAACATTTTTAATATACACAAGATTCGAAACAGCACGTTTCATTTAAA
CTAAGGACAACTAGCTGTATAATTGTCAAAACAAAAACCGTTGGAGACTTTCAAACACCG
ATGAGGGAAAAAATAATGTTTAACTTTTGGGAACATTAAAAAGGTTTGGTTAAACCGTAG
CACAGTAGCACTAAGCTAGAAAAAAGTTAACCCAAATTAATCGATTTTGTTATATCGTTA
AAACGTCCGAACAGTCCGTAGAATGTGACACATAACTGTTCGACAACAATCTGCTCTCCG
CAATAAATAATGACAGAGAATTCGTTTTAAGATTAAAATGTATCAGAGCTTTTTACGTTG
CATGATTAACTCAAGCGGTTAACTTTTTTAGCTTTTGCAGGCAGATATAGTTCCCAGTTC
CCGGCGCGGCGATGTCCCTAACGGCTTGTTGCAGCTGCTGGAGGTAGAATCAGAAGTTCT
GCCAGGTCGTGATGACGAGCATGTTGGTGTCGAGCGCGCGCGCGATGCGCTCGTGCACGC
TGTGACTCAGCCACAGGATGCGCAGCGCTTCGTAGCGCTCGCGGCACAGGTGCAGGGGGT
TGCCGCGGGACAGACCCTGGTCGGTCTCGCCGTACGTGTCGAGGTAGGGCGCGGCCATCT
TGGCTCCGCGCGAGGGTGCGGCGACGAGCAGCAGCTCGCAGGAGCGCACGCGCAGGAACA
TGCCGGCGCCGCGCCCGCACTCCATCGTGTGCGCCACCACCGCGCCCACACGCTCCGTGC
CACCGCCGCGGATCTTTGGAACTTCCGATTGACAACAATAGCTCTGCGAACATAGTAACT
TTCCACAGACAAGACACATCGTTGGGTTCTTACTGTCGTCTCTGTCTGAGTTGGGACATG
GGAAGTCCGACGCAATGTTCATTAATTCAGAGAAATCTTCGGGTAAACGCACTAATTTCG
GTGGCTCATTCGGTTCTATCACCGCACTGGGTTCTATTTCACCGTTGAACCACTCGTCGG
ACATCATGCCCCATTCTAAAGCCTTCTTGCTAGCAATAGGGTTGTCTATCAAGTCTTTGA
AGGTGAGCGGCAAATCTAAGTAACCGCACATAATCTCCCATTTATCGCCGTCGACCGTCG
TCAGTTCTGTAGGCGGGTTTATGTCGCTCAGGAAATAGTAGAATATACAGCAGCATCTTA
GAAACGTGTGACACTGCGTCTTAATTACTTCCCACACTTTATTGGGATCGAGATTATCTT
CTAAATAGCCGCGCCTCAATTCCTTGATTAAGAACAGTAGGTTCTCCAAGTCAGATTTAA
CCGTGAACTCTTCGTGGCCTTCCATGGCCTCCGTGGTACACGCCGATAGATCTATGACTA
TAAGAGCCTTGACTAGACAAGCCCTGAACGCTTGCAGGGTTATTTGCTTCGCCAGGTTGG
TAGGTCTCGCCGGTCCGGCCGCCTTGCAGAAGAGCGAGGGTCCGGACAGCACGAGCGCCA
CCAGCGTGCCGAAGGGGTCGTGCGTGAGCGGCGAGGTGCACTCCAGCGTGTTGAGCGTGC
TGAGCGCGTGGTGCGCCAGATGCTTGGGGGCCGGCCACAGCGCGGGCAGCGCGGCCGCCA
TGCGCACGAGGGCCTGCAGCGCGTCGCGCAGGCGGGACGGTATCTCGACGAGCAGGGGTC
TGTTCTCGGCTTGCAGTATGACGTTGGTGCTCATGATGGTGTATGAGGTCGCGCGGTACA
ATGCAGCGGTACAGGCCATCCCGCCGGATTCAGATGCGGGAAGCACCTGAAAGTTTTTTA
AATATTATTCACACACAAATCTAATTTTTTCATGTCAAAAGAGGTGCATTTTCTG
(1855 bp)

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