SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp37374_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ecotropic_viral_integration_site_5_ortholog_isoform_X2_[Bombyx_mori]
Ontology
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006886 P intracellular protein transport
GO:0007298 P border follicle cell migration
GO:0017137 F small GTPase binding
GO:0030334 P regulation of cell migration
GO:0031338 P regulation of vesicle fusion
GO:0031982 C vesicle
GO:0032880 P regulation of protein localization
GO:0043087 P regulation of GTPase activity
GO:0055037 C recycling endosome
GO:0090630 P activation of GTPase activity
Transcript
Level		FPKM:3.28 TPM:2.42
ORF EntryO_ErmoMG16972_5prime_partial:A_ErmoMG_comp37374_c0_seq2
Sequence
(Nucleotide)
TATAAAGCTATGCTATGCTGGTCTATTTATTCTGTTTCCCTCATCCTTTATTTCTATTAG
TAATATAAATATTACCATAACATCTTCACGTTGTTTTAAATTTCTATCAGACCTTCCATT
ATACTACCTTATGTCTGTGTTCTTTTAAAACATGTTTTAATTTTATTCGCAGTTTTTCAA
TTATACTATTTTGATAAAATATTATTACTGCAACATTACTTTGCCAGTTTGCACCAACAA
CGTGGGTCAAGCAAGAATTTAGATTCTTTTGTATAGGTTATGGTCTCTAATTATACATAT
TTTTTATACTGTACTTGATTCACTCTATTGTATGATAACCGATGTTGCCACTCAATCAAT
TGGACTGGTATCGAATCTGACATCGAAACAGAAACGATCTGGGGACAAAACCAAAAATTT
TTGCATAATCAGAAGCGCAATATAAATATTCAGTATTTTATCAAGGTAGTTACGGAAAAA
AAAAGCTTCGCAAAGCTTAAGTAGTTATTATAAAGCATAGCAGAAATCACATTCATAGTG
TAGCATAGCATAGCTTTATATAGACTGATAAGTCAATCAAATAACTATAAGGTTGCTGTT
TCTGACTCTTAAATATTTGAACGACCAAAGAGTTTTAAAAACCGCTCAGCTTACACTGAG
CAGTGTTCTGTACTTTCATTACAGCATTGTTTATTAATAAAAAAAGAGCAATAGGGGAAA
TAAAATAGAAAATATATCAATCTGATATTTGAAGTATTCGCTAGGAAGGTTTTCGTAGTG
CTGTTGTGAATTCTAAAGATGTTGAAGACTCGCGGCGCAAAGTCATCTTAAGTTTCTCGT
CTTCTTCTAAATCGTCCTCGAGAGATATAGTACGGCTCAGCTCGGTGTGACCAAGAGCTC
GAGATTTCCACGCCTCTAACCTCATGACCTCTGCTTTAAGTTCGGCGACTTGCTCTTGCA
ATTCGCGTACTCTCTCTGAGTCGTCCATATTATTATTTCTTAGTTCGCCTTCCGTTGCCA
TAACTTCGTTCTTTAATTTATATTCTGACACTTCTGTCTCCAACTCGGCTATTCGTTGTG
CGTCCTCCATGTTTCTAATGTTGGCTTGCATCGATTCATACTTAGCCTTGCTCTCTAAAT
CAGAATATTTGTGCTGGAACTCCCTCTGTCTCGTTTGCAAAGCGCGTTCCCGTTGAAGAG
CCGCGTCTAGATTCTCCCGCAGCTGCCGAGCCTCTTCGTCCTGCCTTCGGAGCTGGTTCG
TCGATACTTGCACTTGAGTCTCTAGTTCCATTACCTTCAGTCTTAACTCCTTTAATTCTG
TCAAAGCTTCGACTTCCCTTATCCTGGTGGTCATTAGTTCTTCATCTAGTTTGAGCATGT
CGGCTGACCTTCCCTCCCAAGCCCGCAACAATTTCTTGGGGGTCGCCATTATATCCGAAA
CCACATTCGACTGAACCGGGGCAGCGGGAGCTTCTTGTTTATGCTCCTGCAAATGTCTTT
GCCACGATTCAGATAGCTCAGACACCCGTTGTCGTAAGTCCTTCAAAGACAAGTTAGCTT
CGGCTTCGCGCAACTTAACCGCAATCAATTCGTCCTGCAAGTGGGCGACATTATTGTCTA
CGCGTTGTCTCCGGAGGCTCTTGTTTTCATTCTCGAGTTCATCGATACGAGCTGTCAGTT
CTCGTTCGGCGGCCTCTCTCTCAGCTGCATGTAAACGAGCCCTTACTAATTCCCTTTGGA
GGCAACGCGCCAACTCTTCGTGCTTCTGGCCGCTGGCGCTCTCTGTGCCCTCCAGTGATG
ATTGCCTTGAGTTATTCTCAGCTATAGTCATCTCTAGAGATCTAATCTCGTCTAAGGCAA
CACCCAGCCGTTGCTGTGTATCCACGTTAGCTCGTCGTAGAGCCTGAACTTCCCGTGCTA
GCGCGAAGGTTTCTTCTTCGCCTTCAGCTCGATCCACTTGACCTCGAACCAGACGTTCGG
CTAGAGCTGAACTCTCCTTCTCTAGTAATTCCACACGTTGTTTCAAGAGACGATTCTCTT
GACGGAGACACCTGAGCACAGCGATATCGCCTTGTTCCTTCGTCTTAATAACGGTATATT
CCTTCTCTAATTTTTTCATCTTTTTAGGATTGACTTTGATTGAATAGGCCAAATTCATGA
ACGCGGCTTGATCCGCTTCTGCTTTCGAAGGCAATTCTTTCTGGATGTACTTTAGAATAC
TTTCCATATCAAGAGATAAGAGATCATTCTTGCCTAATGTGAGCAATGCTAAAGCTACTT
TGAAGACAATCTCGATTCCTTCCGAGAGAAAAACATCCATGATACGGCAAGCCAGTGGCA
GGGATAATGTCGTCGTGAACAAAGTTAGGAACCAACTGCTGGCGTAGAGAGACGTACTGA
AGCCCTGCGATTGGAAGTGCACGTGTAAATCAGGCAGTAGTTCTTGCACCAAATTCTCTA
GTTGGAACATACACAGTCCCAGTTCCGCCATGCTCGGCTTGAACATGTCACGCATGCGAT
GTTGCTGCATTATTTTAACTAACACCGCGAACGCTTCTTCTTCCGGCATCTGCATCAGCA
ATAAGCCAACAATAAATCCAGAACCCTGACAGTAGCCGACTTCTCGATCATGCAAAGAAT
ACGCCTTCATCACATTGAACAGAGACTCCTGGCCGAGACCATCTTTCTCTTTGAAGAAAT
CATGTTCCGGATACGTACGCGCTATGTCGCGACGAATAACCTTTTCGCAGGCCGATTTTG
CCTTAATATAAGAGGCGTAGAGTTTCTTTTCGGGCGATGTATCAACACCGGCCAATAGCT
GCCAGACGATGCCTCTAAAATGGTGTGGGACACCCTGCCGTACCAGGTCTCGAACCCATT
GGTTCCGGCGTTTCCATTCCGACTCCCAGTTGCTGACGAGACGACCCCAAAGAACCCAAA
GATCTTCCTCTCCGTTACTGCCAGGGGTTGGACGAGTTTCGACCTCATGACTCGAGCTTG
TGGCAGATGCAAGGGAAATCAGCGAAGTGTCGGAACTCTTCCTACTGTGAACGGTAGTGA
GCGAGGCGTTCTTTGCATCGGCCTCGATACGACGATTTTCTTCCTCCAGCTTGGCGAGAA
GCGCCCGTTCGGGCGTCGGGATAGGTTCAGTTGGCGGTATGTGGCAATCGTCGAGAGATG
AG
(3182 bp)

- SilkBase 1999-2023 -