SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp37352_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		adaptor_protein_complex-1_gamma_subunit_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0017137 F small GTPase binding
GO:0019894 F kinesin binding
GO:0030117 C membrane coat
GO:0030131 C clathrin adaptor complex
GO:0030136 C clathrin-coated vesicle
GO:0030665 C clathrin-coated vesicle membrane
GO:0030742 F GTP-dependent protein binding
GO:0031410 C cytoplasmic vesicle
GO:0035646 P endosome to melanosome transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0043323 P positive regulation of natural killer cell degranulation
GO:0045954 P positive regulation of natural killer cell mediated cytotoxicity
GO:0048471 C perinuclear region of cytoplasm
GO:0055037 C recycling endosome
GO:0090160 P Golgi to lysosome transport
Transcript
Level		FPKM:8.77 TPM:6.45
ORF EntryO_ErmoMG16878_3prime_partial:A_ErmoMG_comp37352_c0_seq1
Sequence
(Nucleotide)
GCCTCTGCACAGCCGAAGTATCAACATGCACTGTCCTCAACAAAGTATTCAAGGCAACAT
ATCTTATATTCTTGTCATTATTCAACAAGAATCTTCCTAGTATATTGACAGCCAGTACTC
GTAGACTGCTCTCAGACTTGATATCCATGATAGACAGTACAGTCTCGTACAGTATGGTGT
TGCCAACGTTTTTGCTTGTCTCCGTGTTGGTCGCTACTTGTGCTAGTATGTCGTTCATCG
CTTCAGAGGCTTCGGCATCGTTCTTGCCCAATATCCGGAGGAGACGAAGGATTTTCACCT
GTAGGAACGGATCAGAAACCCCGCTGACGTCATGTTCCGGAGAATATCCGGCCAGTATCA
AATTCTTTAATATCCTCACCAGATTAGGAACGATCTTTTTGAAATGATTAAGCGTGTCAG
GACTGTTTTCACACATTTCAGTGATAAGAGTGACTCCGGTTATTAGGACACCGTGATTCT
TTTCAGTGAGCAGACTTCTGGTAGCTGGCAGGAACATCTCCATTAGATCTGGTACCCTTT
TTATGATCCTGAAGGCGCATAAAGCGGCCTTCTTCTTGATGTAGGCATTTGGGGATTTGA
TAAGACGTTCTACTTCGGAAGCCAGGTCTCTTGCCATCTCTGGTGATGCGATGGCCCCTA
AGGTACACAGGGCGAGACCCACCACGAACTGAGTATTGCTGTTTAAGTCGTTCTTGAGAC
AGTTGGTGATGAGTAGATGGACATCCTGACGTTCGTCTAAGAGCAGCATGGCGCCGAGGT
AGCCGACTCGTTTGTCCGTAAACCGAGGACTCGCTATCAGCTTCAGACACTCCATTTGAC
CGAAGTGAGCTGGGTAGCCCAGCATGTGAATGTAGAGGAGTTTCGCTATGTTGCGACATC
TCCAAACACTGTCCTCTTCTCTAAACGTGGACCGTATGTAAGCACATTCCTTATTGACGA
CACTTCGTTCTTCTGCCGCTGTCCTGGCCGCCCTGATCTGCCTGATGAGATCCCTGAGTC
GGGTCGGAGTGGGCATCCGTACTGAAACCGGCGCGACTCTTTCTATGGCCTCATTTACCA
CTTGTTTGATGGAGGCAATATTGAAAGCCGGGTTGAACCTTCTGTTTTGCTCAGGCGGCA
AAACACTCCAATCTACTTCATACATAGGATATGCCATAGTTGTGATGAAAAACACAAATT
TAACTATAAACTTTTTAATAAAAACATTTCACAAAATATGCCACATTTGACGAGAGTGCA
AAACGAACTGTTTGTTATCAGACGTTTTATCAGGTGCAGGTGCTCCTCAAATATCCAGTC
ACAACGTATCTCTTATCAAAGGTACTATTTATCACTGAAAAAGGATAGCGATACCGCTTC
TAGTAATGTTTTATTTTCAAATGTCAATACTGTAGAAAACAATGGAGTGTACGATGTACA
TCACATTATCTTAATAGGAAAACTAATTATTATTCATTGTATTATGTAGGTACGTCTCGA
TACGAGTATTGAACGTGCATCGAGTGTCGCTCTTTAAATGTTCATAAGTTGTCATCTTGG
TTACGGGGAGGACGGTCGATGTTGTTACGTTTTATGCAATCCACGAGCCATCGGATGCCT
TCGTCGACGCCATCACCAGTCAAAGCTGATGTTGCCATCAGCATGATATCCCCTGCATGG
GCGTCCACACAGTGAAGCCCATCTTCAATCAAAATGCACATTTGATTGGCGCAAGGGAT
(1739 bp)

- SilkBase 1999-2023 -