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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp37291_c1_seq14
Scaffold_id
NCBI non-redundant
(nr)		Pre-mRNA-processing_factor_39_[Papilio_machaon]
Ontology
GO:0000243 C commitment complex
GO:0000395 P mRNA 5'-splice site recognition
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030627 F pre-mRNA 5'-splice site binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:0.33 TPM:0.24
ORF EntryO_ErmoMG16599_complete:A_ErmoMG_comp37291_c1_seq14
Sequence
(Nucleotide)
CCACCGCAGCAACACTTTGCTTGCACTGCAGCTATTTTTTGAATTCCATTTTTTTTTCTT
TTATCTAATTATTTTCAATATTTCATATTGACCATGTAACTCAGAGATAAATTACCTATC
TTGAAAGAAAGAATTTTCTAAATAGGTTCAGTAGTTCCAGAGTTTACTTTCTACAAACAA
ACTAACAAACTTTACCTCTTTGTAATAATAGTATAGATAGAGACTAAAGTACAAAATCGA
ATCATAATAGTTAAATAGAATACTTCCACAGAAAAATAGATGATTGTCTATCACTTTTTT
TTGCAATGACGTTTCACATTTTTTAACCTCTCTTGGTCAGATTGGCTATAATGCATGCAA
TACTTTTATGCATTGTACTATTTCAATATGAAATCTCACAAAAATGCCGGCAAGTCTAAG
CTCAGCATAAACTTTGTGGACTATACCTACCTACTTTTTATCATAAGTAGATTATCTCAT
TGCTAAGGATTTTGTCCCCTGTGGTAAAAGAACGAAATTGAAAGTAGTAACGTAAATTTC
GAATCTAACCATTAACTGATTTTCGAGATTTCTGAAAAATACAAATGCCAAAAACTTAAA
ATTTAACGAATATTTACCTTATCCCGTTCCAATGGAGCTGCATAGTATATTTTCTCTTTC
CACAAATCGAAAAGGTAAGAATCTTATTTAAAGGGTAGGATTTAACAATAAATTTTAAAA
GGAACTACTAATGCGGCAACATCCATATTAGTTCACAAATCAATGACGATGGCAGAATAG
TGTTGTACGCCTTTAAATGCGCTTAGCCGCCTCTATATCTGCAATGTCATAAAACTATGT
CTGAACATTAGCAATTCTATTTTATTGGAGGTACGCGCCGTGCGGTGAAAGTAGGTGCTT
TCGTGACTTGTTACTGTGCGTATTAGCACCTATAAAACAAAATTCTGTTCAGCATTAATG
TGAAAAATCATGTTTTTCTGCCTGCGTGGTTAGTGTAAAGCAGGTGTAGCAGGAGTGTGT
CGAAAGCTAGTAGTAGTTGGGGTACTGCGGCCAGGCGTGCGGATGGTGTTGGTAGGGTCC
GGGCGGCTGCTGGTATCCCCAGGGCGGCTGGTAGGGCTGCGTGTAGGACTGCTCGTAGGA
AGGCGCGCCGGTGGCGGGCGCGTAGTAGTTGGCGCTCGTCGTGGGCACCGTGCTACTACC
CGTCGTCGTGTTCTCTTTCTTCTTGGCGTCCGTTAATACTGGCGGCGGCGGCGCGTCGTG
CTTGTCCTTGCGCGTCCGCTTGCGCAGATGTTTGGCGAGCGAGCGCGCGTGTGCGTGTGC
GCGTCGAGCGTGCGCGGCGTCCCCGAGCTCCTCGGCCAGGTCGCGTCGCCGCGCCGCCAT
GCGCGCGCTCTCCTCGGGGTCGGCGCCCTCCTGCTTGCAGTACGACTGGGCCAGCTCATC
CAATTGTTCATAAGGAATCCCAGGGGTGTTGATAGCAAGGTCTAGCCTCTGCAAATGTAG
TCTCGGGTTGAGTGGATCTTTGAGGACGGCGTCGTCGAGCACAGCGCGTGCGGCGGCGTG
CTGTAGTCGCACGTGCTGCAGAAACCGTGCGTACTTGATGGCCAGAGCTGAACTTATCGA
CTTGTTCTTGGCACCAGCTATGTAGGTTTCATACAGTTGAGAACACTTCTCGTAGTCGCC
GCGGCGTCTTTCCAGGTTCACCCGTCTGTACTGTATTTGCACAAGATTGGGACATGTTTT
TTCTATACGATCTAGTATTTCAGCTGCTTTGGCAGTGTTGCCTTGCACTTCCTCGAAGTG
TGCCCAGTGGAGGTGTAACTCTGACTTGTCAAGATGGTGCACGGTGCAGGCTCGCTCGAA
AACTTCACGCTCTATTAATATCGCTTCAGGATCTTGTTCAGCATGCTCTTCCAAGAACTT
TATGAGCTTCATCCAAAACTCTTCATATAAAGCACATGCAATAAGACATCTCTCATGTAA
AACCAGAGCTCGCTTGAATGAACCATGTTGCTTCTCCCATTCCAAATATGCCTTCCAGTT
CTTTAATTGGCAACGTTCGAGTGGCTTCACATGGAAATATGGACGTTTTATTCCCTCTTC
GTAAGTCCATCTTGCAGCTACTTCTTCGCCTGTCGTTTTATGAATTTTTCTGCGAGATGA
AACAATGCGTTCTTTTATAGCTTGTGCTTCTTCGTCGGATGCAATGTGGTCGAGTGGTTC
GTCCTCCCCGGGCGGCAGGTCCAGGCTGGGCTGCGCGCCGGCCGCCTCGCGCACCTCGCC
GCGCAGGCGGACCAGCTCGTCGTGCGACACCACGCCCGACACCGGCTCTGACATCACGTG
CTCTTGGAAATTATCGAAATGTGAAGTATACCCTAATGTAGGTGTTGCTAAAAGACGATC
GTATATATTTGTAACACTGAGAGCAGAACCATTTTCTGCTTCCCATTTGATGTAAGACTC
CCAGAGACGATCCGAACGAAATTCTAAGCCACATGCATCTATAGCTCGTTCGTACTGAGA
TCTTATGAATGTGTGGTCGTCTGTTCTTGTTGCTTTTACATGATTTAGATAATGAATCCA
GAGGTCTACAGATAGTGGTATAGCTTTAAGTCCCCTTTCCAATACCTGTAAACCAATTAC
TGATCTTAAAATAATTTCGCGAGCGTTCAAGCATTGTCATTTCGACGACAATACTATGAT
AGCAAGGGAATATTCAATAGCATTATATAATATTATGTATTTTTCAATAAATTTTACAAA
ACAGAGGAAGCGAGAGGTCGCACCTATTGCAAGCTCAAAGCATGGTCACAACATCTCGCT
TTATCTATTTATAATAAAATGTTTGTTCGGGCATATTACACCTGTTCTTAGTGCGACGAC
GGGCTCGCGTTGTCTTCGCCGGAATCTTCAAAATGGCTAAATAAGGAGGCCAGCTTCCAT
CCGTGCTAACGTGCTTTCATGGATTAGTTTTAACTTAATTATATCCATAAGTCATTATGT
ACTTAGTTA
(3009 bp)

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