SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp37255_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_sprint_[Amyelois_transitella]
Ontology
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005938 C cell cortex
GO:0006897 P endocytosis
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0017016 F small GTPase binding
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0019901 F protein kinase binding
GO:0030139 C endocytic vesicle
GO:0030971 F receptor tyrosine kinase binding
GO:0032483 P regulation of Rab protein signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0048675 P axon extension
Transcript
Level		FPKM:2.39 TPM:1.76
ORF EntryO_ErmoMG16428_5prime_partial:A_ErmoMG_comp37255_c0_seq3
Sequence
(Nucleotide)
GAAATACTGACATTAGTCGGTACCGTAGTTCATAGGCACCATGATGTGGCGGTTACCTTT
GCCCACATTCAATCTCAATTGTAGTAACAACCATAGACTTAGTTAATCTATGGTAACACA
TACCGATTACAGCTCATAAAATGTTCACCAGTATTGACTGACAAAACACGAATTCCAGAG
ATAATCTAATGTATTTGAACCTCAAACATCTTACAAATTATGTTGACTAAGGATAAGACA
TTAAAGCTTGTTGTGGCCAAGCGATTTTCGCGTCTATCCTTCTGTACGCAAGGGTGAAAT
TCTGTCCGGTCTTCTCTGACATCACTTCCTGTGGGCAATCGTTCTCGTTCAACAACGTCT
CGTGTCCATCATGTAGTGCGAATAAAGCGTAGTCCTGTGGGTTAGTAATGGCGGCGGCGT
GTGCGAGCGCCCGACACAGGTCCCTGGCGCGCGCGCCCGGCCGACACGGCACCGGCACTC
TGCGTATAGAGCCGCGACACTCGTCGGGCAACACCACGCGGACCACTGCCACTGGACACT
GATCCCGATTGTTGTCTATTGAACCTCTTCGCCACGGTGTTGTATTATCCGATCCTGTTT
CTGGAGCCAATCGTTTAAGTACTGCGACAGCAGAGAACAGAGCAGTGAGGTAGTACCCGC
CCTCGCCGGCCAACAACGCGGGGGGCAGCAGCCCCGCCATCAGCTCCGCCTCCAGCTCGG
CGCACACGAGCCGACTGCGAGCTACTGTCCAGGCCAGCACTGGCAGCAAGTCGTCGGCTC
CTAGAGTACGTTCGCCGCGGATAGCATTAAACATAACTGATATAGCCGCTAGTAAGTTCT
CTAGTTTATCGAGCGGCGAGTCAGCTTCTTGCATCTTCAGGAAATGCTTTGAGATCACAG
CCAATACTGCCGCTGATGGAACTTTTGTTGATTCCTTAATCCCTAGTTGTAGTGGTGTAG
CATGTTGTGCGCGTTCAATGGCGGCGTGCAGCCGGCGCACGTCGGGCGCGTGCCACGCCG
CTAGCAGCGAGTACAGCCGCGCACGGAGCGGCCTCACCACTAGCCGGTGCATCACCGCCT
CCAATATCGCGTCCAAATTCAGGAACTCAGTCGGTTTTAACTTCAGTCTTTCTTTTTCAA
CTTCTTTCTCGAATTCTCTTTCGCCGTGTTTAACCAAATAATTCTTCATTCCGGACATAA
ATTGCCTTATGTTTCTCATCATAACCTGTGGACAAGTTTCCTTCGAATCCAAAGTGCAGG
ATATAAAGTTATCGATGTTTTGAGCGAAGGTTGTGCTCTTGTCCTGAGCGAGGTGTAATG
CGTATGCCCGTAGCGCTGCACCTGCACCTCGAGTTGTGCGCCCTCCTCTAAGAGCCCGGA
CACGACCAGCTGCAAGTAAAGGATCCAGACGATCTCTGAAACTCTTCGTTCGGAGCGACA
AAGCTATTCCTCTTCTTGGTACGGGCGACTCCCATTCTAAAGGTTCCTCCGTGTCATATG
GCTGTTGACCGTTACAAGGTGGTATTAGACCGTCCCACTGTGAACTGTCCCATGGCTCCG
AGAATACTGTTCCATCGTCACTTGCCTGTTCGGATAAAGGCCTCAAGTCGTGTACATTGT
CATAGCAAGAAGCTCGCGGCGGCGATCTCACTTCTTCAGGTAACGCGGCTGGTTGTGAAT
TCAGTCTTAAGTCTGGTAACCTCTGTGCTACAATTTGGTGAACGGTTAAGTTCTGTGATT
CATCGTCAACTCCACTGAGTCTGCACTCCTGCTCGGCCAGTGAAGGAAACGTTCCATTCT
CACTGTTTCCGCTTTCGTCGTGCTTATCTGAGGCCTTGGTGTTAACGCGCGGCGGCTGCA
CCGGCTTCACCTTCGGCTTGTTGCGAATCGACACGAGGTTGTCCACTGATGATGATGTGT
TGGGTGATGATGGCGACAATTCCTCAATGCTGTGCATATCTCGTAGTGGGTAGTAAGGGT
GATTCTGATTGGGTGGTTCCGAATAACGTTGGGAAAGATTCAATCCAACACGGATCAGCT
TACGACGCTGTACTGGCGGTAACAAAGCAGCCTCTTTTAAAGCATCAACAGGATCAGCGT
AATATGGACTACCCGTATTATCTTTATCTGAAT
(2133 bp)

- SilkBase 1999-2023 -