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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp37232_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		putative_spliceosome_associated_protein_[Danaus_plexippus]
Ontology
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005684 C U2-type spliceosomal complex
GO:0005686 C U2 snRNP
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0071004 C U2-type prespliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:7.14 TPM:5.26
ORF EntryO_ErmoMG16279_complete:A_ErmoMG_comp37232_c0_seq1
Sequence
(Nucleotide)
AATTTGACAAGTTACGGAAAAGAGCAAAAGTGAGTTCAAGAAAAATATTTGAAAATAACA
CAATTTGGTAATTTGTACCACAGATATTGTAAAGTAATTGATTATTTTGTTTATCATTTA
CTTCTTTCTTCCACCACGTTCCTTGACCTGCAGTTGTATGACAGCGCCGGGCGGCACATT
GTAGTAAGCCAGAGTGTTCGTATCTTTGAAGAATAGACCCTCGTAATGTAACTTCTGTTT
GGCCGTGGGCATGTTGGTGGCGCGCTGCAACATCGACTTGAGGTCGGCGACGGGCGCCGA
CAGCGACACGCTCAGCGACATCGCGCGCCCGTCCAGTCGCCACTCCGACCGCTCCGGGGC
CGACGGGAGCGACACCTGTAACGGCACAACTCCTGGATGTCTGACGAGCCACGTGGCCTC
CGGTTCCAGAGCGTCCTCCGTGCGGGCTCGCTTGGCGGCCGGACCCTCCTCCTCCTCGCC
TCCGGCCGCGCCCCCTACCGCGCCCCCCGGGACCACGCCGCCGTAACCGTACGTGGGGGG
AGGAACTCCACCAACTGGAGCCGGCATAAGTGGCGGTCTGGGTGCCATAGGGGGCAACAC
CATTAGCGAGGGTAGCGGCTGCAGCAGCACGGCGGGCGGCGGCGGGGGAGGCGCGCGGGG
AGTGGGGGGCGGCGCGGTAGGGGGTGCCGGGGCACGAGCCACACCGCGTCCACCCACCAC
GGGCTTCGGACCTATCTTCTCTTTCTCTTCATCTGGTAGTAGACCTTTGACCTTGTGTAT
CTGCTGTATCTGGTCCTCGAGCGTGATGTGCGCGCGCGCGGCGCGGGTGGCGGCCTCCAC
GCTGGACGTGTGTCCGTCCCACGTCACGCGCTCGTCTCGCTTCTTCTCTTCTTCACCTAT
CTTCTTACCGATCGTGGTTTCTTCGTCACCCACACCGAAAATATCGGTACGACGTTCAGC
GAGCTGTTTAAGTGAAGCCTCAATCGCAGCTCCAGGTGCAAGAGCTTCATCCCGGTCGGT
TCTCTCTGCAGCGGCTCGGTCCCTTTGTTCCAGCCAGCGAGGGTCCAGCAGTCCAATACG
AACATGCTCAGCAACTTTACTAGCAGGGATCTTCTCTCCAGTGATGGGTGATACAAGCCA
TTCGTCTCCGGCCGCTGCACGTGGCTTGGCTTCCTTGGGATTGTATTTCTTGACGACGAC
GCGGTCGGCACGGGGCGGTAATGGTGCTTCCTCCGGTCGCGTTGAGTCTTCGGTTTCAGA
CTCAGAGGTTGAGCTTTCCTCTTCCATATCCTGCACACGATTATCATCAGGACGATGAGG
CTGTGTTCTATCCTCCATTTCCGCCAAGTCCTCATCGGATTCAGACTCAGATTCCGACTC
AATCTGCATCTCAGTATCATCATCATCATTTTGATTCCGAATTATATCTTCACCTCTCTC
TTGGGCTAAAACACGAGCTCCAACTTCTAGTGGAGTGGTTGGTGGTGGGAAGTCTCCTGG
TTCACCTGCAGGATAATCCACTGTTTCTACTACAACGAAGTCATGCCAATCGATAGATGC
GTAGGCAAGTCTTTCTTTCTCAAGTTTAGATTCATCGGCTGCCTTCCGTTTAGCTTGGTG
AGAGTGCCATGCGGCGCGACTGCGAGCCTGTTCTAATATGCCACTACGTATCTCTGCACC
TAACTTCGATACTAGCTCTTTTGGTGGTAGTAACACCTTCGTGTACTGTTCAAGAAGACG
TGTAAAATACTGGAACAATGAATGCTGGGGACGAAGAAAATCAAACTGGTGATTCCGTTC
CTCTTTCTTCATTAGATCTGTTAAAAACTGACGGCCGTTTCTGGCGACAAATTGAGCAGT
CAGTTTCACTATGTCAAGTTCCAATGCTGATATGGATGGAGGGTCGGCAATAAACTCAAA
ATCGGGGGGAGGGTCCCGTGGTGGGGGTAGTTCAGCAGGTGCGGCTGCTTTAAGTAACTC
TTGTTGCCGAGCTGCGGTTGCTGGAGCAAGACGTGTTTGTCCTGGTATTATGATTGGGCC
TAATATTTCTGGAACTTTTCCCTCCTTGATCTCTTTGACTTTGTGCTGATAGTAAGCATG
ATAGGGATCTCCAGAGTTGAGAAAGTTGAACTTGGGATTGCCCAATTCATTCTGTCTGAT
TCTAGCTTCGAACTCTGGTCCATTACGGGCAACGAAGCTTGCAGTTTTGTCAACAATATT
TCTAACTTCCGGTGGTGGATAAATAATACCAATCACAGGAGGAGGAGGTGGCGGTGGTTC
TTCGGGCTCTAGTGCCTGGCCCGGCGGCATCATGATATCTATTGAAGGCATTTTGCCCTT
TATGTCAATATGTTATTTCTATCCGAGCTGATTTTGTAGTTCCTTCGGAATATTACTATT
TAAGCGAGAAAAATAACAAAAAAACAAACGAG
(2432 bp)

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