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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp37201_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_serine/arginine_repetitive_matrix_protein_2_isoform_X2_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
GO:0047485 F protein N-terminus binding
GO:0070742 F C2H2 zinc finger domain binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:7.81 TPM:5.74
ORF EntryO_ErmoMG16140_complete:A_ErmoMG_comp37201_c0_seq1
Sequence
(Nucleotide)
GTAATTTAGTAGCACACCCTTGTTAGTAAAAATTTCACACATTTATATACTACAAACAGC
CGGCAAAACGACAAAAAATAATTTACACAAATTTGAAATAGAAACAACATTACTTTTCAT
GTTATTATAATATATTATATAAGAAAATAAACCTTATGTCGAGAACAATACATGTAAACT
TATATTTATTTCACACTAGCACAGTCACTTCACTAATCGGAGCTACTACTCGTGTCTTCT
GAACTCGTGCTATACTTTCGTGATTTTTTTCTCGACGAACGTGTGGATCTGGATGAACTA
CGCGATGATCTTGAAGATGACCGGCTACTGCTGTATGAACTTGAACCGCTTGATCGAGAA
CGCCCTGAAGAGCTGTAAGATCTGGACCGCGATGAGCGCGACCGTGATCGGGAAGACTTC
CCGGGAGATCGCGACGATCGTGACCAGCTGCGTTGTGTCGCCCTCCGCTTGCCCTTCTTA
GTACCGGTCGCCTCCTTCTTGGCGGGTGAACCCTCGGGTTTCTTAGTCTGCGATCCTTCT
GTTTTCTTCACACTCGGCGAACTCTCCGCTTTCTTCACGGCCGATGAAATTTCCCGTTTC
TTCTTCGCGGGTGAACTTTCAGATTTATTCGGGCTCTTATCTTTTTTAGGACTCGCGTGA
TCTGAGCTCTTGTTCTTTTTTGCAATGGGTGATTTTTCTTTTTTGTCTTTCTCATTTTCG
TCTCCGAATCTTTCAGCAGTATTATTAGAAATGGATTTAGCTTTTAATTCTTTTTCTTTT
TCCAACTGATCTTTCATTTCCTTTTCTTTTTCAGCTTTCTTTTTTAATTCCTTTTCTCTG
GCTTCTCTTTCTTTTATTTCTCGGTCTCTTCTGATTTGATTTGTCATTTCTTTTTCTCTT
TCGATTTGGTCTCTGATTTCTCGTTCTTTTTCAATGTTGTCTCTTGCTTCTCCCTCTCTC
TCATCTCTATTTCTTCTGCCTTCGTGAGCTGAATCAGAACGTAAGTTTTGTGACGTGGAA
GGTCCGTTAATATCCTCGTTTTTCCTTCTCAGTACTGTCTCGCGGGTCATTTGTGCCAAT
TTTACTTTTAATTTTTTAAGATCCATGCACTCGATTTCTTCTTGGCGTGTTTTCTCATCC
AAAGCCAAGAAGTCTTCAACGGTATCGTCTAATTCATCGCTAGACGAGTCTCTCATGCAG
GAAACTTGTGGTTTATAATCTTGATGTTTCTTCGACTTTCCTGGATGAAGGTCTGATGGT
GATTTGATATATTTTCGCTTATCCTTTTCTGGTAACTTTTCTATAATGTCTCGATATCTT
TCAGGACTTCGACGTGCAGGTGAATAACTAAGGCTGGACGAACTTTTACTTCTGTGTCGT
GATCGAGACCTTTCATCGCGAGATGTTCTCGCATCATTTTTGGTTCTGTCTCGTCTGGTT
TCGTTTTTTAAAGGTGACTGATCTCGATTTTCAGGGGATTTTTTGCTGACTTTTTTCGGT
GTTTCACCCTTTCCCTTGCTTCTTCGATAGTTTTTACGAGCAGGAGATTCAGATCTATTA
GCAGACCTTCGATGTCGTTCAACTGACGACGATTTTTGTCTAGATTGACTATTTGGCCTT
TCTGGAGATTTGAGGTATTTATATCTGTCTGTTTTTGTAGGAGACGATTTTTTCTTATTT
GGAGAAGGGGTACTTCGTTTCCGCTCTTCAATTTTTGCGGGTGATATACTGCGTTCCTTG
TAATACCGTTCATAGACTTTAGATTTATCAGAATTACGTCTAGGAGATTGCTCCAGTTCA
GACTCAGATGAAACAGATCGTCTACCTGATTTTGATTTCGTATAGGGCTTTTCGATCTCT
TTACGTTTATCTTTTTGCTTACTGGATTTAGGTGATTTCTCTCTAGTTTCAGCTGAGGTA
TCTCTACGATCTCTAGACGGGGTGCTGTTCTTCCTTCTTCTGGGCTCATCACGAACATCT
TTATCTCTCCGTTTTTGATAGTTATTGTCAATCCTATCTTCGCTTTTGTGTCTATTATCG
TGCCGTGAGCCTCCTCTATTCTTATAAGAGCCTTCGCGCCTTGATTTCCGGTAGTCCGGC
GATTCAATTACTCTTTCGTTTCTAGTTTCTTTTTTATCTTCTTTTTCAGAGCTTTCTCTA
CGAGTTCTTTCTTTTTCTTTGTCCTTGTCTTTTCGTTCCTTCCTCTTGTCAAACGAAGGA
CTTCTACGTCTTCGCTTTTCAGCGGGCGGTGAAGTACTACTTCCCCTGTGAGATTTCTTG
TTCTTCGCATCTTTGTTTCTGTGCGTCGACCCTTCTGTTTCTGAATCTGAAGCATGTCGC
CGTTCCTTATCACGTCGAGATCGTTTATCCTCTCTCTGCTTTGGTGACTTTTCTCTAGAT
TTGTCTCTGGAAGGTTCGCGTTTTTTGTTGTCAATTTTAGTGATGTAGGAACGCTGTCTG
GGTTCTGGTGAGGATTCCCTGGAATTACTGTGATCGATACGCTTAAAGTTTTTCCGGTCT
CTGGTGTCGTCTCTTCTGTCATATCGTCTCCGTTCGTCTCTCTCTACGTCCGATTTCCTG
TACTGATCGTCATCACGTCGAGGCTCAATAGAACGTTCCCGACGAGGTTCAACCGACCGA
TCGCGATTCTTATCTTTTGATTTTTTTACTGGTGAACTATCTCGAGTGGCCGCTTCGCTG
CTGGCGCGACGTTTGTTGCTCTTTTTCTTTTTCTTTTTCCTTTGCTTCTCGTCGTCCGAT
GAACCGGAGTCAGAGTCCGCTCCATCTGAACTGCTGGAACTCTCACTGTCTGAAGATTTA
GAGCGTTTCTTCTTCTTTTTGCTTGATTCATGCTTTTCTCTTTTGTTCTTTTTCGACTTT
TTCTTTTTCATTTTCTTTGCTTCAGGCGATGTGCTTCGTTTCTTTTTCTTTTTAGCGGGT
TGGTCGTCTCTCTCATGGCTCGGTGTACGCACCAGCGGGTACCGTTCCGCTTGTTCCTTG
GCCCTCCGCTCCGGATCGAGACTAGACCCCTCAACAAACTGCGGCGATATACCAAAGGCA
TCTCTCAACCGAGCGTTCTTCTCCTGTTGAGCTTCAGCCACAGCGTGCGTTTCGCGAACA
GCTACCCTCCCGAACTCATCCCTCGGAACGTCTTTATCGTTGCTGCTCTCGGAAAGTTTC
GCTCTGAAGGCAGCAATACGAGCCGCTATCTCATCCTTCGGAAACCCTTGTTCTTCGAGT
GTATCTTCTAACTCTGCACATTTGACTTCGATCTTCCTTTTCCTCTCGTGGTCGAGTATC
TCTCTATTAGGTTGTTTGTTTGATGCCGAATCCAACTTTGCGATTTCATCTTCCGTCCGG
TAACTGACGGAATCTTTCGTTTTGCGTACTGATGCCCAATTTCTTTGCACGTAGCCATTT
GTACCGGAACCTCGTGGCGTCGTCAGTCCAATCCCATTATACATTATCTCGTTTTATTTA
CAATTTAAAGTGATTAGAATATTTATTATTTTGTGAAATACAACACGACCATCTTGCAGG
AT
(3542 bp)

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