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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp37170_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_afadin_isoform_X3_[Bactrocera_cucurbitae]
Ontology
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0005913 C adherens junction
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0017016 F small GTPase binding
GO:0021537 P telencephalon development
GO:0021987 P cerebral cortex development
GO:0030054 C cell junction
GO:0034334 P adherens junction maintenance
GO:0043547 P positive regulation of GTPase activity
GO:0045177 C apical part of cell
GO:0048854 P brain morphogenesis
GO:0048872 P homeostasis of number of cells
GO:0050839 F cell adhesion molecule binding
GO:0060019 P radial glial cell differentiation
GO:0060563 P neuroepithelial cell differentiation
GO:0070445 P regulation of oligodendrocyte progenitor proliferation
GO:0090557 P establishment of endothelial intestinal barrier
Transcript
Level		FPKM:5.69 TPM:4.18
ORF EntryO_ErmoMG15993_3prime_partial:A_ErmoMG_comp37170_c0_seq2
Sequence
(Nucleotide)
GTCGAAGTTACGTTTGTATTTGTGCAATATTTGTTCTTTTGGAAGTTGGTACAAAGAAAA
TGTTTTAATTCTTATACAATTTACACAAAAGTTTGAAAGTTCTATAAATTTGTAAAAGTA
TTGACAACATTTGTAAGTTTTACTGTAGTTTAAGTTCATGTGTTGTGATAAAGTGCTAAC
GGTTCTTTGAGTGCCTTCAAAAGTTTTAGATTTCATAGAAGTTTACTAAAGTGATTAGTG
ATTGTTTTGTTTCTGATTGATATATTACGTAAATTATGATTCTGTTGGGGTTTCAAGAAA
TTATAAGATAGCATGGCGTAGATTTCTACTACACTCACAGCTGTCCAATAAATACCTAAC
CACGAATATTCTGCTTCAGAAATTGGACTCGATGCGGTGACACGATGGATCCAGCTGACA
AGCGTATGCTGGAGCGTGAGGCTCTTCGCAACATGATACACCAATGGAATGCGAATCGCT
TAGATCTATTTGCCCTCAGCGAACCTAATGAAAACCTGGAGTTCCACGGTGTGATGCGTT
TCTACTTCCAAGATCTGGGTCAGAAGATAGCAACGAAGTGTATCCGTGTCGCCTCCGACG
CCACCGTCAGCGATGTCATAGAAATATTAATCGAAAAGTTCCGTCCGGACATGCGTATGC
TCTCACTGGGCTCGTACTCGCTGTGGGAGACCCACGGCCCCGACGACGAGCGCCAGTTGG
AGCCGCACGAGAAACCCCTACTCGTGCAGCTCAACTGGCACGCAGACGACAGAGAAGGGA
GATTCCTACTTAAGTGCCTTACTACTAATGATGTAACCGTCGCAGGTTCAGAAAAGGGAG
ACCAAAACTTCAAAAGAAAACTGTCCAAAAGAGAAAAGAAAGAGTTAAAGAAGAAGGAGA
AACTTTCAAGATTGAAATCTGATACCAATGATGAAAATAGACCAGTTGCCGAGAAGCTTT
ATACTGAACTACCAGAGACGTCGTTCATGCGGAGTATCAGTAACCCCGAGGCGGTGATGC
GTCGCCGCCGACAACAGAAGCTGGGTCGCAAACTGCAACAATTCAAATCTAAAGATGGAG
GACCTGATACTGGGGGAACGTTGAGAATCTATGGCGGTATTCTGCGACCAGATGTATCTT
ATATAACGCTCCTGTTATCTGTCAACGATTCAGCGGCGACTGTTCTGAAAGAGACTTTAG
AAAAATATGGAATGGGACACCAGGACCCTCTGCAGTTTTGTATCGTTCAGGAAGATAAGA
CTGACAACACGGAGTATATTCTTGAAGACGACGAGTGTCCTCTCGCGCTGATGAATATGA
CTCGAAGCTCCATCATGTTTCACGTGCGGCGTCGTCCGGCGGACTCACAGCCTCGTCGAC
GTAAGAAGAAGGTTGGGAATGGTACCAGCGGCCGTCCAGGGAACGAACCTTTACTGGTGG
AGGTCGCGCCCGACACCACGCCTCTAGAGAATGGACGAAGGATCCGGATCACAGATGTAG
TCGAGGTTGGTTCTGGCAACGGTACCGCCTTACAGCTGTATGGTCCTTCGATACAGTCTC
GGCACTGTGTGGTCGCTCCGGCTGACGGCGGTGGGTACACGGTGACGCCGATGCACGCTG
ATGCTCAAGTTTACGTCAACGGACAGAGGATAATGCATTCGCAACGATTACAGCACGGAT
GTCTGCTTAAATTCGGACGCGTATCGACGTTCCGCTTCGTGGACCCCGCGCAAGAAAACA
TCATCAACAGAAACTTGGCTCAGTCGCAACATTATGGCTCCGGATCCATATACGACAGGA
TGGGTGGAGGTCGCGTCGGTCAGGAGGCGATCCTTCCGGCCGTGCTGGAGTTCCCGGAAG
GGGGCCAGCAGCAGTTCCTGGCGGCCGTCATCGCGAGGTTAGACCCTCACGCGCCCGCCT
TCAAACTCGCACCCGTATACACGCTCTATCTTTGTGCCAGATACCGCGCTTCAACCCACT
ACCGGCCCGAGTTGACGCCGACCGAGCGAGCCCACAAGCTGACAGCCTTCCTACATCACG
TCGCTACACTCATACACGCCACTGTACAGGAACGCGCCAGTGATTCAGCCGCCCAAGCGT
TCTGGATGGCTAACGCTAGTGAACTGCTGCACTTCCTCAAATATGACAGACACATATCCT
CATTTTCAACTCAAGCTCAAGAATTACTAGCTATTACCGTACAAAACGCATTCAGTAACC
TGGTGTCGTGCTTCGAGGAGAGCCTGGGTGCCGGGCTGTCAGCGCTGACGAGCACGAACA
GCGCCGAGGGCACGGCCGCCACGGAACCCGTGCTGCAGGCGCTCGCCGCCGCCATGGTGC
TGCTGCGCCGCTGCAGAGTCAACGCCGCGCTCACCATACAACTCTTCTCGCATCTCTTCC
ACTACATCAACGCAGTCTGCTTCAACAAGGTGGTGAGTGAGCCCGGTTGTGTGAATGCAG
CATACGGCCGAGCGTTGTCCGGGCGACTAGCGCTAGTGGCTGCCTGGGCCGAGCGACAAG
GACTTGAACTAGCGGCTGACTGTCATCTCGCAAGAACGCATCAAGCTGCTCGTCTAATCC
AAGGCGAGTACCGCACGGCCGAGGAGGTGCGGGCGGCGCTTTCTGCGTGCTTCAAGCTGA
ACTCCGCGCAAGTACGTGCGTTGCTCGCTCCCATCGCGCCGCCCGACGTGGTGGAGGCCG
CCGTGCAGCACGCCAGGGCACTCGCCGACGAACTGTGCCGAGCTGACGGACGAGAGATTC
GAGTAGAGGAGGGCGGTTGGTTGGGCGCCGGCCTGCTGATCCCGGGCGACGGGTTCAGCG
CGGAGGTGGTGCGGGGCGTGCCCCCCGGGCTGGCGGAGTTCGTGGCGCCGCTGCAGCGTG
CGGGGCTGTG
(2890 bp)

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