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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp37164_c2_seq3
Scaffold_id
NCBI non-redundant
(nr)		putative_splicing_factor_pTSR1_[Danaus_plexippus]
Ontology
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:3.33 TPM:2.45
ORF EntryO_ErmoMG15971_3prime_partial:A_ErmoMG_comp37164_c2_seq3
Sequence
(Nucleotide)
AAAAATAAATTAATAATCAAGAGTTTTTCTAATAATGTGATATACTATCATCTCTCACTT
ATAAAATAAAATGTTGTATTGTCACTTGAATATACTCACGTCAGAGTGGCATTAACTATG
GTAAAATGTGCTTTTCAGAAAATGCCCAACACTAGTCTTTATTGCTCATCACAATACTTA
ACAGATGAGGGATAGATTGTATGAGTTAGGCTGTTCTGTAAGTACCCAGATGTACGTATA
AAACATTTATAGTTAGCTGAATGTAATCTTTCTGCTAAGCAGGATTTAATTAAATATGGT
CTTTGTCATATTAAATTGTTTACTAATGCTGCATTGGTGAGTACATATAAAATTTTAGGA
TCAACAAAAAACTTAGCCTGGTGTGAAATATTTGGTGACATACAATATCTACGTTGGGTA
TGTACTCTGCTGTTTAAACGTGTAGGGGTACAAAACTGTTTGCATGTGCTAAAACAATAA
ATAAATCTTGAACATAATATCATTCTCAAAAACCAAAATCTATGCATAACATAATAGAAA
AAAAAATGGAAATTTTAATATTTTGTTAATCATAAGAAATAATGTCAAAGTAAGAAATTG
TTAAGTGACAATCATAACTATTTCAAATTCTAATACAGACTACACTTTCAGTAATTTATC
CGTTATAGTGCTTGATTGTCACATTCATTTTGTTTTATGGCTTCAATTCACTCTTCATAT
CAAATAGTATTTTAAGATATTCTGGCGGGTGTTTCCACTGTTTTTTGTAAGTATTTGAAA
AATTATTATAGAAGGAGGGAGTAACCAGCTCAGTGTGCATTTCTTGGTGTTATTGTATGT
ATTTTATATTCTATTTTTTTACTTTGGAAATATTGAATTATTGATGTTATATGCTCTGAT
TATGTATTATTCCACTAAGCAATAAGTTGTGGAGTCTTATGAGTTTTGGAGGCATAATAT
CGAACAGGACCTTGTGCCAGACCCTTCAGATTTTTATTAAAATGAACATTTACTTTTCAT
GTGGTTTTAATTCTTTTTTTGCAGCGTATGGATTTAGGTGAGTGTCCCAAAATACATGAT
CTGGCTCTACGGGCGGACTATGAGATTGCTACCAAGACCAAAGATTATTTCTATGATATT
GATGCTACGGAGCACTTAGAAGCCTTCATAGCTGATTGTGATCGTCGAACAACAGCTGCC
AAACAACGATTGGCTGAAACTCAAGAAGAACTTTCTGCTGAAGTAACAGAAAAAGCAAAC
TCTGTTCATGAATTGGCTGAGCAAATAGGACAAAAGCTGGCTAGAGCTGAAGCACTTGGT
GAAGAGGGTATGGTAGAAGAAAGTGTGAAATTAATGGGAGAGATTGATGAGCTTCGTAAA
AGGAAAGCAATTGCTGAGCAAGATTATCGTAATTCCATGCCTGCTTCATCTTACCAACAA
CAAAAGTTA
(1449 bp)

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