SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp37164_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_putative_RNA-binding_protein_Luc7-like_1_isoform_X3_[Amyelois_transitella]
Ontology
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:12.53 TPM:9.22
ORF EntryO_ErmoMG15970_complete:A_ErmoMG_comp37164_c0_seq1
Sequence
(Nucleotide)
TTTTTTTTTTTTTTTTTTTATGATTACTTTATTGCAACAAATAAAAACAGTTTCATCTCC
AAATCACACACACTTTACTAGTTCTTTTACATACCTCAAAGACAATTATTTCTATTATAT
TATCTAAAGTAAGTTTCGAGAAAGAGCAATAAAAATCTAAACAATATTACAATTAAATGT
AACTATGATGCTTATAACTAATTTCCAGTTAGAAATACTATTAACTAAACTGAATATTGA
CTTTTTAATGCAACTGAAAACGCCCAGGAACTATTCGAACGAAATCTTTACAAATCACAC
CTAACAATGACCCATTACAAACGCTTTTATGTTTTAATAATAATATAGCAAGACAACAAC
TTGCTGATACCAATACGTTTTTGAAAATATTCTTGAAATATTAATCACATTATTTTGTCA
ATCACTCAACCGGATCAATTCTGAAGGCACTTTATTTTGGTCTTTGTTTATAATTTATTC
CACATGTAATGTATTTGAGTCACCAGCAGGATGATTCATAATCATCATCATCATCATCAG
TGGCTCCACAGCTCTTTGTGGGCCTTGGCCTGCTCTAGCTTCTCCCTCCAGCCTTCTCTG
TTCAGAGATACCATCGTAAGTTTGACCAGGATGATTACAACATTACAATTCATATCCATT
TAGTTCATTAACATTTGTATAGTACAATTAATAAAAGAGAAACAAAATTAATTCTACAAA
ATACAGAGGACTTTCTATGACTAACTTGAGAAAGCTGTATTATGATGTCATGTGTCATGT
TTCGTTTTTTTGTCACATAATTGGAACTTGTGAAATAGACTTGTTTAAGATACCTTCAGA
ATTAGATACGAGTTGGTAGATATGTAATAAAGAGTGCGAACTAGTCGCGACGATGGTCCC
GAGACGAGGAGCGATGCGATCGACTACGACGAGTCTCGCGAGCGTCGTGACCTCGAGTTC
TTTCTCGTGAATTCTCGTGTCTACTCCGACTGCGTGATCGGCTGCGCTTCTTTTCACGTT
CACGTTCTCTATCCTTGTCGCCACGTTCTCGATCCTTTTCGCCACGATCCCGTTCCTTCT
CGCCACGATCGCGTTCCTTGTCACCACGATCGCGATCCTTATCAGTCCGTTCGCGTTCTT
TGTCACCACGTTCGCGATCATCCTTGTGTCTTCCGTCCCTGTCTCGCGCAGACTCGCGAT
GTCTCCGAGCGCGGCGGTCTAGCTCCCTGCCCCCCACGTAGTGTCGCCGACCGCTGCTAC
GTTCACGTTCTGAAGCTCCGCGTTCTTCGCGTCTCCTGTCTACGTTTTTCTTCAGTTCAG
ACAATTTTTCACGAATGGTTATAAATCCAAGATGCAATTTTCCTCCAAAGTGGTCAGCCA
ACCTTCTGTCATTGTCATGAATACCAAGATAGGCCGAACAGACTTCACATACACGTAACT
TTTGTTGTTGGTAAGATGAA
(1460 bp)

- SilkBase 1999-2023 -