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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp37162_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_histone_deacetylase_8-like_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0003713 F transcription coactivator activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008283 P cell population proliferation
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031398 P positive regulation of protein ubiquitination
GO:0031625 F ubiquitin protein ligase binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044770 P cell cycle phase transition
GO:0044822 F RNA binding
GO:0051443 P positive regulation of ubiquitin-protein transferase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:0070062 C extracellular exosome
GO:0070979 P protein K11-linked ubiquitination
GO:0071383 P cellular response to steroid hormone stimulus
GO:0071385 P cellular response to glucocorticoid stimulus
GO:0097027 F ubiquitin-protein transferase activator activity
GO:1903955 P positive regulation of protein targeting to mitochondrion
Transcript
Level		FPKM:12.75 TPM:9.38
ORF EntryO_ErmoMG15965_complete:A_ErmoMG_comp37162_c0_seq1
Sequence
(Nucleotide)
GTTTTCCTTGTGTTACGGGTACCACTTACCATCGTGTGCCTTATAACTAGATAGCCTAAT
CGGGCATAACTAATCTAGAAAATAAATTGAATAAAGCTGTATTAATGCTATTGGTTTAAG
TTTTTGTTTTCAGAAACGGCGCCCAAGGTTTCTGTTACGTAAATGATATTGTTATAGCAA
TAGAAAAATTGAAAGAGAAATTCAACAAAATATTATACATCGATTTAGATGTCCATCATG
GTAATGGAGTTCAAGACGCATACAATACTAGTAAAACAGTGTTCACATTGTCATTTCACA
AATTTGAACCAGGTTTTTATCCCGGCACTGGTGGCTTAGATGACATAGGTTCAGGTGATG
GAAAAGGATATTCATGTAATTTTCCATTACACGAAGCTTATTCTGATAATACTATAGAAT
TTGTTTTTGAGAAAGTTTTCGGCTTTATTTATTCACATTTTGCTCCCGATGCCATTGTAA
TGCAATGTGGTGCTGATGCTCTGTCTCACGATCCAAACGGTGGAGCGTGTCTCACCAGTC
GCGGTTATCGTAGCTGTGTAAAAACTGTACTAGATAAACGAAGACCCACCATGATACTAG
GAGGCGGAGGATACAATCACACAAATACAGCACGTCTTTGGACCACATTGACTGCTTTGA
CTGTGGGTATTGAATTGGATGAATTAATCCCTGAACATAATGAATGGCCTGAATATGGAC
CAGATTATATGCTGTCTATTCAACCCACCTTAGCTCGAGATGCAAACAAAAAAAAATACC
TGCAAGACTGCATCAATAAGATTAATGAAAATATGAAAATATATTTAGGTAAAACTGAAA
AACTCGAACCTGCCTTGAAAAAACAAAAGACGGAAGAATTTGCAAAAGAACCATGTTACA
AAAAAAGATACAATTATATTCCCAAACATTATAGTAACATACAAAACCGAAACAGTACTT
TTAATAAAGATGTATACGATTTTGATGAATAATAAAATGTAATGTGAACAAAACATTGAT
TTAGTGTTAAAAAATTCAACTATCAATAAAATATAATTTTAATTGTGGACTGAACTTGTG
ATGTTAACAATAGTATTTATTACAGACATCAAAATATCCCGTATTTGTTGTTCATTCTTG
GGGTTTGTTATTCGAACTGAAATTGAACATCAAATTGAATTATTTATTTTGCATAAATTG
ATTATGATGTTATAATGAACTGTTGACTATGTTTTTGAATTGAGACTTAATTAATCTACC
AGAATTTAACAAAATAAATACTCTTCTATAGACAATGGTATGAAGTACAATATTTAGCCA
GTAACTTTATTAACAACAAAGCAACTCAATTTGTGAACGATTCTGTAGTATTATATGAAT
TAAAGAATTCCAGGTAGTAAAATGCAATTCATGTAAGATATGCACATCACCTTAGTATTT
AAAGATACAAATTCAATAGCCAATCTAGTCTGATGTAGGAAATATCAACATTTAAGCCAT
TTAATGGAAACTGCTACTATTGTAGAAATTAAACATCTCTTCATTAGAAAAAAAACTAAG
TATAATCTTTTAAATTTTTGGAAGATCTAAATATAAAATCAATCATACATCTATTAGATT
AAGTAACAAAATTTTGTGTGTGCTTCTGAATAGAGCGCAAGCAAAATGGTGATATGACAA
AAGCAAATGCTAAAATAGGACAGGCCTGTTTAGGATTATTTGACAAGAGGTTTACAGCAG
TATTTTCCAACATCATTTACATGAAATTTTCAAATTTAAATCATTTGAAACACTGCTGTA
AATTTGGATTTACAGTTGCTAGTGTTTATTTAATCAGTAGGCCGTTTTTCACTATGTTTT
TTTGTAAATTCTTCAGCATTCTTTGAAAACTTCTTCCTGTCTTTAAGAAATTCTTCGGCC
AATTCTGCTCGCAGCGGATGCTCGGGTTCAGGATCATTAACAAGAGCCACTAGTGCTTGG
ATAACTTGATCAGTCTTGGTAGCTGGTTTCCAATTTTCTGCACTAATTATGGGCAGACAC
ACTTGACCTTTCTCATCAATATTAGGATGATAGATCTTTGTTTTGAAACTAATTTTTGGA
GGCTTGAATGGATATTCAGCTGGAAAGTTAATCTCAATACGGAAAGCCCCCTTATTGTAT
GGTGGGTTATCCGGTACAATTAAACCTTGCCATGTCAAGATATTGGACTCATCAACCTGT
ATTTCTCTGAAAGATTTAAGTCCTGATTGTCTGATATCATTCAGTTCCTTTTGTAATCTC
CTTGTTGCAGCCATTGTACACTAAATTTGCAAAAAATTATCCAACAATTTCCGAAAGTTT
TCTTTACTAATATTCAAACACACTGTTTCTCACTCCAAACAAACAACATAATTATGCAGT
TCGATATGGATTAATCGAATTAACATAGAAAATGACAAGAATATCATAAATCTTGTAAGT
AGAAGAAATACGATGACCAGCAGTCGTCGACAGTCG
(2496 bp)

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