SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp37139_c0_seq6
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_cycle_like_factor_b_isoform_X1_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003053 P circadian regulation of heart rate
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007622 P rhythmic behavior
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0032922 P circadian regulation of gene expression
GO:0042594 P response to starvation
GO:0045187 P regulation of circadian sleep/wake cycle, sleep
GO:0045475 P locomotor rhythm
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0048148 P behavioral response to cocaine
GO:0048511 P rhythmic process
Transcript
Level		FPKM:2.70 TPM:1.99
ORF EntryO_ErmoMG15846_complete:A_ErmoMG_comp37139_c0_seq6
Sequence
(Nucleotide)
CAGATGTGTTGCTGCAGATCTAATTTAAAACATAGGCTATGTTATAGTTCAAGAAAATAT
ATTTTTTGATTCCCAGCGAGGTGAGCACGGGTCAGCTAGTATTGAAATAACGTAAAAAAT
CTAAAAATTGTCGTATGAAATTTGCACCCTCCTCTTTTATGCCCTTGTGGGATGATTTTA
TAAAAAATTGTTTTTATACGTGTTTCATAACTTTCAATTAAAGAACCTTCATATTTTATT
TCATTCAAATAACTTCAAAAACGGCAGTTTGATACTAACTTTGCACCCCTATTTTACCAC
CTTCAGGGTGAATTTCCTAAATCCTTTCTTAGTGCTCCCCTACGTTATAGAAGGAAACCT
TATGCAAAATTCCAAGTTTCTAACCCTTATACCACTACAGATACACAGGGCCACCCCTCT
CTCAGTCATTAAGTTAGCTTCTCAAAAAATCCATTCTTCAAAAGGAGATTTTTAACCATC
AGCGTAGTATCATTTTTTGGGTCGTTCGGACCCCCATTTACATATATTTTTGCTGAAAAA
TTCAAGTGTTTGTACTTAGCGTTTCTGAAAACTACGAACTCTCTTCGTGCGATGGTCAAC
TTCCGCCGAATCATGGACAAACACTGCAAGTACCAACCGGCGCCGCACGGAAACGAAAAT
CTTCTTACACGACGAGCCCTTACGACGATGATTGCGACGACACCAGGTCTACAACGACAA
CAACAACGACGATCACAACTCGTCCCGCGCCGGACAAGAAACAGAACCACAGCGAGATCG
AGAAGCGTCGCCGTGATAAGATGAACACGTTCATATCGGAGCTTAGCGCGATGATACCGA
TGTGTGGCGCGATGGCCCGCAAGCTGGACAAACTGACGGTGCTGCGCATGGCGGTGCAGC
ACTTGCGCTCTGTGCGGGGCGCGCTCTCGGCGTGCCCGCTGACGGCGCGACCCTGCCCCG
CCTACCTCTCGGAGCGGGAGCTGAACGCGCTCATCCTGCACGCGGCACACGACTGCTTCC
TACTCGTTGTGGGCTGCGACCGCGGGAGGCTGCTCTACGTCTCCGCCTCCGTCAAGAATA
TCCTGCATTATGACCAGTCGGAGCTGTTAGGACAAAGCCTTTTCGACATCTTGCATCCAA
AGGATGTGGCTAAAGTGAAGGAGCAACTGTCATCTTCGGATCTTAGTCCTCGTGAAAGGC
TCATCGACGCAAAAACGATGTTGCCGGTGAAGCCCGACGTGGTGGCGGGTGCCTCCCGTC
TGTGTCCGGGAGCGCGACGATCATTCTTCTGCAGGATCAAATGCAAGGCGTCCCTCGAAC
CGGCTGACACTCCTCCGGACAGGCAGGCTGTTAAGGAGGAATCGGAAACCACTAATAAAC
TGCGGAAAAAATACTCGCACGAGAAGAAATACTGCGTCGTCCAATGTACCGGTTATCTGA
AGTCGTGGGCTCCGGCCGAGATGGCGGATGGCGCCACGGCCGAGGGTGGGGAGGACAGCG
AGGCGTGTAACCTGTCGTGCCTGGTGGCGGTCGGACGGGCCCTGACCGACCTGGTGCCGG
GGGAGGCCTGCCCGCCCGCGCCGATGCCCCAGACCAGGAGACTGCAATACGTCTCGAGAC
ATGCTACTGACGGGAAGTTCCTGTTTGTCGATCAGAGGGTGACCTTAGCTCTGGGTTTCC
TTCCCCAAGAGTTGTTGGGCACGAGCCTGTACGAGTACGTCCACGGCCCAGAGCTGAGCG
CCGTGGCCCGGACGCACAAGACTGCTCTGTTACAGCGGGACGTGCTACACACGCCGCCAT
ATTGTTTCCGCAAGAAGGACGGCACCTTCGCCAGAATACAGACTCACTTCAAACCGTTCA
AAAATCCGTGGACGAAAGACATCGAGTGCTTAGTAGCTAATAACACTGTGATGGTCGAAT
CACAACCGCTGAAGCAGGATTCAGGCCAACCCTCATACGATGTTTACAAACAAAAGGCCG
ATCTCGAGATGCGACGTCTCATAGACTCTCAGGTCGAGTCTCATAAGATCGGGAGCGCCA
TAGCCGAGGAGGCCTTGAGGCGGGCCTCGTCGGACTACTCGCCGGAGCTGCCCGCTGACC
TCTTGCAGGACGCCATGTTCAATCAACAGTTTTCACCGCTGCAAGTGGCCCTGGTGGACA
ACATCTTGGGTATCGAGACCAGTAGTTCGGACCAGGTCCGTAACAACGTGCCACTGAGTG
CTGCCAGCTCGTTCAGTCCCCCCGCACCCCCCGCCGGGGACACGGTCATCTGCGACACCC
CCCCTCCGGCGTCGCCGCCCCTCCCGCCCCTGGCGATGGACGGCAACGGGGAAGCGGCCA
TGGCGGTCATCATGAGCCTGCTTGAAGCAGACGCAGGCCTGGGGGGACCCGTCAATTTCT
CGGGTCTACCCTGGCCCCTACCTTAGACCTCATACTTGCCATTCACAAAAACGACTCAGA
AATAACAATTCATATCACCCTTATAACAAAATTACTTTATATTTGAATTTGTAGTAATAA
GTGTTATTAATGTACTTGTGAATTTTTTCTTAAATATAATGAGAAAGTACTAGATTTTTG
GTAGTTGACTCTGTGTTGTTTATAAATGTCCATGTAATCTGTAAATGTATGTGTTCAGAC
ATAGTGACACATCTTTCAAATAATTATTTTGTGGAGAGTAGTAACTAATTTTCAAAGCAT
AATAATATACACATCACACCAAATAAATGTTAATTTGTATTCCTTTACGAAATTCGTTAT
AAAGAATATAAATATCGGATTCCCGACATGGTCCAGTCAAATTGGTCCAAAAGACGACAG
AAATACCGAGCTTCTGTGTCTGAGTCAAAATATTGATATTTAACATCAAATTTACTTTCC
AAAAAATTAAAGCAACTACCCATTTTGATGTTAAAGTTCTTTTGCTTATGGTAATCAAAT
TAACAACTTCGTTATACTAATGGTGAAACGATTTCTTCTAATAAATATTACAAAAAAAAC
TTTGAACTAAGAATTTTATAATCGTGACTCCTATGGTTTTTTTATAAATCGTTTT
(3055 bp)

- SilkBase 1999-2023 -