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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36976_c2_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ATP-dependent_RNA_helicase_DHX8_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:4.36 TPM:3.21
ORF EntryO_ErmoMG15139_5prime_partial:A_ErmoMG_comp36976_c2_seq1
Sequence
(Nucleotide)
CTAATTCCTTCTGCGTCTCACTCTTGATATCCTCCAAGCATTAGGTTCCTCATATTTGTT
ATACAAAGGTTCTAATCTCTGGTTCTTTTTGAATTTGGACAGCTTAGTTGGGTCCGAGAA
CTTGAAAAAGGCGGGAGCAAACTCAACCAGCCATTTCGGGTCTATGGTCGTGACTTCTCT
CATATACTCTTTAGTAGTTTGCACCAGTTCGTGGTAGATTACCCATTCGGGTTGTCTATT
GAAGAGTGCACTTGAGGGATGTATGTAGACAACTTGACTGTCCACCAAAGTCCTGTAACC
TTCTTGTGGGTCCTTCTTCGCTGCATTCCTGAAGAAACCGGAACATATTGTCTTTTGGAT
GCGAACTGTGTTCTTACCCGCAGACACCACGTCTAGTTTATGCCTATCCATAATTCCGAG
TAGCTGTTTCCTGACATCCTGAGCCCGCTTCAACGTTCTTATCTGAACGAAATTCTCATA
ACACCAAGCGTTGGAAAACTTATTATTCCTCCAACTATTATAAACGGCCAGTAACGTTAA
ATGATCTCCTTCTGGTTGGTTGAACTTGGCCTTCTTCTGATCTGCTAAGGCCTGTTTGTC
TTTCGGTCGGTAGAATACGTTTTGTACGCTCAACATGGATACTATTGTCAGTATTTCGTC
TGAACATTGGAGTGCTACAGACATAATGAGGATCTTCGATAGGTTTGGCTCTAGTGGAAA
TTCGGCCATCCTTCGTCCCAGTCTCGTGAGTAGTCCCTCCGAGTCGAGCGCGGAGAGGGA
GTGCAGTTGTTCCAGCGCCATTATCAACGATTCGACCGGCGGAGCGTCCATGAAGTCGAA
ATGTAACAAGTCGTTTATTCCCATCGTTTTTAATTGTAGTACAGTAGTAGCGAGGTTGGT
CCGCTGTATCTCGGGCACGGGCGTGGGCAGCATCTCGTCCCTGTAGGCGCGCTCCGTGTA
CAGCCGGTAACACTTGCCGGGCCCGGTGCGACCGGCGCGGCCCGCCCGTTGCTTCGCGGC
GGCCTGTGAAATAGGGGTTACGACCAACGAATCCATTCCAGTCTTCGAATTGTAAACCTT
CTGTTTCACGAATCCAGGATCGACAACGTAATAAATGCCGTCGATTGTCAACGATGTTTC
CGCTATGTTGGTAGCGATCACCACTTTCCTCGACCCAGGAGGAGCGGGCTCAAAGATCCT
CGTCTGCATTTCCGACGGCAATGCCGAGTATACCGGCAAAATGATCAATTCCGGCACATC
TGGTCCTAAAGACTTCATTCTCTCGTACAAAATTTCGCAGGCCGTATCAATCTCTTCCTG
TCCAGTTAAAAACAGAAGAATATCGCCCGGAGGTTCTCTGAGATGGATCTGCATGACCGT
GATCAAAGACGCGTCCAAATAATCCGTTTCCGGTTCCTTCGTGTAAAGTACTTCTACGGG
GAATGTTCTACCGGGTATCGTGAATATTGGAGCTTCGAAGAAATACTGTGAGAATTTGAC
GGCATCTAAGGTAGCTGATGTGACTATCAGTTTTAGTTCTGGTCGTTTTTGGACGGCTTG
CTTCAGGAGACCGAACAGCACGTCCGTGTGTATTGTGCGCTCGTGAGCCTCATCCAACAT
GATAACTGAGTACGCTTTGAGGTCGAGGTCCATGAGGCATTCCCGTAACAACATACCATC
TGTCATGTACTTGATGACGGTGTCGGGGCTGGTGCAGTCCTCGAACCGGATGGTGTACCC
GACCTCCTGTCCTAGCCTGCAGCCGAACTCCTCGGCGACTCGTTTGGCGACGGACATGGC
GGCGACACGTCGCGGCTGCGTGCAGGCCACCTTCCCTCGCGCCGTGAGTCCGCACTCGCA
CACGTACTGCGTTATCT
(1877 bp)

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