SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36976_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ATP-dependent_RNA_helicase_DHX8_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:4.56 TPM:3.36
ORF EntryO_ErmoMG15134_internal:A_ErmoMG_comp36976_c0_seq1
Sequence
(Nucleotide)
TAGCGGCGGGCGCGGGGCGGTCCGGATTTCTGCCTTCCCGCTCCGCTTCCAAATGTGCAT
GAGATGTCGGATTCAGATCCTTGCCTGTTTCTTGACAAACGTCCTTCATAGTGAGGGACA
CTTTTTGTCCTGTCATGGAAATTACTTTCACCTTGACTTTATCGCCTCTGTTGACGACAT
CAGACACATTAGTGACCCGACCTTCTGCCCGTAACTGAGAAATATGTACCAATCCCTCCC
ACCTTTTCTTAACTCCCTCAATTTGAACAAAACACCCAAATGGTACAATATTGGCGACGC
GGCCATTGTAGATCTTCCCAGGTTCAGGATCATCATTTAGTTCAACTTCAGGACTTCGCT
TCCTGCTTTTCTTACTATAGTCGAACTTCTCCTCTTTATTTCTTGAACGAGATCTTCTAC
CACGTGAGTTTGACCTTCTGCCTCTAGAATGAGATCTCCTGTGTTTGTCTCGAGACCTTG
ATCTGTGGCGATGACGACTTCGTGATCTTTTTCTACGGTCTTTCTCTGGACTTCTACTTC
TCCTGTCTCTGCTACGACTTCTCTTACCGCGACTCCTGCTCCTTTTCCGTCCTCTACTTC
TACTTCTCTTACGATCTCTACTTCTACTCCTTCTCCTCTTAGATTCTTCCACTTTAGTCT
TATCTTTGCGGTCCTTACTTCTGCTGCGTTCACGTTTTGGAGGTTCTTTGCTTTTTGGTG
CATCTTTAGTGGAATGTGAAGGTGCTAGTGCCTCTAACTCGG
(762 bp)

- SilkBase 1999-2023 -