SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36968_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nipped-B-like_protein_A_[Bombyx_mori]
Ontology
GO:0000795 C synaptonemal complex
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0008278 C cohesin complex
GO:0010468 P regulation of gene expression
GO:0010628 P positive regulation of gene expression
GO:0032116 C SMC loading complex
GO:0034088 P maintenance of mitotic sister chromatid cohesion
GO:0035327 C euchromatin
GO:0043234 C protein-containing complex
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0070193 P synaptonemal complex organization
GO:0071733 P obsolete transcriptional activation by promoter-enhancer looping
Transcript
Level		FPKM:6.63 TPM:4.88
ORF EntryO_ErmoMG15124_5prime_partial:A_ErmoMG_comp36968_c0_seq4
Sequence
(Nucleotide)
CTGTACAGATTGTACCATATTTAATAAGTATGAGCACAGACTTGGAAGTTACGGTATCAC
ATACAGCTGATAAAAATCTTCAAGAAATAGATAAGAAATATCCTGGTTTTATTCATATGA
AAGCACAACTGGGAATTAAACTTTCATACCAATTGCAAAAAACGTTGCAGTCGAACAGCA
GGGATAAGAACGTCATTAGAGGTTTTAGGAAAAAAGAACAAGACGATTTACCTACTGCGC
TTAATGGGTTTTTGTATTCATTATTAAGGAACACGCGGCCTCAGAGACGAGCTTTAATAT
TATCCTTGCTAAAACAGTTTGATGATGTTTCGACTGCGCCTTTAGATCAGATGCTGTATC
TGGCTGATAATTTAAGTTATTTTCCATATCAAGTACAAGACGAACCATTATTTATAATAC
ACCATATAGATATCATAATTTCAACATCAGGGTCTAATTTATTACAGCTTTTTCGTGAGG
GTTTAATAAAAACGAGTTCTGCGGAAAAGGGCAACGCGGAAGAGGAAGAAGAGGAGGAGG
AGGAGGACGCGGAGGCGCTGTGGGCGCGCGTGCCGCACAACACGCGTGCGCTGCGGGACG
CCATGCGCCAGGCGCGCGGCTGTCTACTGCTGCTCGTACTCAAGCAACACCTCAAACAGC
TATACGGATTCACTGACGCAAAAATCAATCAGTACTCTCCATCTGAGAGCGCGAAGGTAT
ACGAGAAGGCGGTGTCGCGGCGACACGCGCCCATCTTCGAACCCAAGGCCACCATACTGC
AGCTGCAGGACCACGACTGCGAAGACGAACTGGACGAACGCGGGCGGCGGAGACTCATTA
ACGACTACCTCGAATTGAAGCAGTTGATGCTGAAGTTCGACCCCGAGGAGGAGGACGAGG
AGGAGACGGCCCCTCCGCCGCCGCCGCCCACCTAGCGCGGCGAGGGCAGGTCGCGAGCCG
CCCTGTACAGCCATCCGCGACTCCCGCCCTGAGCCCTCGAACTGCGCGCGATCCTCAACA
ATTTGTACAACTTATATTTGAGAAACTTTTGTTTTTTTATAACTGAAAAGTCTTGTGTGT
AGATAATTTTTATGAAGAATATAAATATATGTATGTACCCACACCGTTTTAAGTTTCCGT
GAAACGCGCCGGTGAAAGGCCTAAATAGTCACGGCGCGGCGGTCCATCTGGCGACCGACT
GACTTTGTTAAGATTTTTAACTTTAGTTTTTTTGCATAAGAGAGAGAGAGGGTACCCGTT
G
(1261 bp)

- SilkBase 1999-2023 -