SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36967_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_SCAF8-like,_partial_[Plutella_xylostella]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016363 C nuclear matrix
GO:0043175 F RNA polymerase core enzyme binding
Transcript
Level		FPKM:1.00 TPM:0.74
ORF EntryO_ErmoMG15097_3prime_partial:A_ErmoMG_comp36967_c0_seq3
Sequence
(Nucleotide)
CGAAAATGACTGTAATTTTGTATTCAATTGATTATCGCGATGTTAAATCGTAATTATTGT
TAATCTCAAATGGGCACCGTAACAAAAATGGAAATGCCAGAAGTAAAAGCGTTCAACTCG
GAGTTATCCGGGTTGTACGACAACAAGCCGCCTATATCAAAGGCGAAGATGAGTGCTATC
ACTAAAGGTGCTATAAAGGCCATAAAGTTTTACAAACACGTCGTGCACAGTGTTGAAAAG
TTTATACAAAAATGTAAGCCCGAGTACAAAGTGCCTGGGTTATATGTGATCGATTCAATA
GTGCGACAGTCCAGGCACCAGTTTGGGCAAGACAAGGATGTTTTTGCTCCCAGGTTCGCG
AAGAACATGCAACAAACTTTCGCGAATTTGTTTCGATGCCCTCCTGAAGATAAGCGTAAC
ATAATCCGAGTGTTGAATTTATGGCAGAAAAATAATGTGTTCAGTTCACAAGTTATCCAG
CCATTGTTGGACATGGCTGATCCAAATCATCCACTACATCAAGAAATACAACAGAATAAC
GCTGCCAATGGAAGCAGCTTAAATATAAGTCACAACACATCTGACAAACTATCACCGATG
CAGGCACAGCATACACCAAGATCTGCATCTCCCATGGGTGATGCGTTCCAGGATGATTCA
TCCGGACCACCGCCCGGCGTAAAATTCAATAGGAAGTTGCTAAATGACTTTGAATATGAA
AGTGAAGATGAGCTTCCCCCGGAAGCACAACAGCAAAGCACCCAGTCGACCCACACGCAC
TCCTCTCACACGGGTCACACCCACACGCACTCCTCTCACACGGGTCAC
(828 bp)

- SilkBase 1999-2023 -