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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36966_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_KGM_10653_[Danaus_plexippus]
Ontology
GO:0000166 F nucleotide binding
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0001129 F obsolete RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly
GO:0003677 F DNA binding
GO:0004402 F histone acetyltransferase activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006461 P protein-containing complex assembly
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007221 P positive regulation of transcription of Notch receptor target
GO:0008134 F transcription factor binding
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0022008 P neurogenesis
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046425 P regulation of receptor signaling pathway via JAK-STAT
GO:0051123 P RNA polymerase II preinitiation complex assembly
GO:0051726 P regulation of cell cycle
GO:0060261 P positive regulation of transcription initiation from RNA polymerase II promoter
Transcript
Level		FPKM:3.26 TPM:2.40
ORF EntryO_ErmoMG15085_5prime_partial:A_ErmoMG_comp36966_c0_seq1
Sequence
(Nucleotide)
AATAAAATGACTTATTCTCTTTTCCTTATTCTTCTATAGTATTTTAACAATTTATCATAA
AACGCACATTTTTGTAACAATATAAAAACAATAATGTTCACATAGTAAACACATTTTACT
CATTTGAAACATAAAGTCAATTCTACGAAGAACGAATTACGTACGAAGAACGACGTAAGA
CCGAGTAATGGCTTGTAGGTTTACGAGTTAGATAGAAGAGTCAAAGATAGAAGAGTCGTT
ACAGTTTGAGACCGACTTTCATATTAAGTTGTCTGGGTAATCTTAATCAATCCAATCTTT
ATATTTAGACTTGTTCTACCCATTTTTTTATAATGACCTCAAAAACTAATTTGAAGGTAC
AAATAACTTGCTTATACTTCTAGACGGAAGTGGAAACTTTTGATTTTTCTTAGTGTATTG
CCGAACACAATATTAGTGATAGATTATGTAAATATTAAAATTAAATAAATTCGATAGTTC
TCTTTTGCACTGACAACTTAATGTTTCATTCTAATGAGTAAATGAGCTCACGATCTGCAT
ATAGAGTCGTTTTATTCTTTAATATTTAGAACCACAACCCATCTTCTGGTTCTTCCTCGC
TGTCCGTAACTTGAAGGTCATCTTGAATGGCGGGTTCGGGCTGCCAATTTTCTGGTGGCT
CTTCTTTGAACTGCTGAGGTAGAGGTTGCATGTGACTTCCTTCCATCATCGGCGGAATCA
TTTGCAAGTCAGGTTCAATCGGCTCCTCCTTGACAATAGGCGGGTAATTGTAATCAGTCG
GCTGGTCGAGGTCCACAAAGTCCTCTGAGGGCGGAGGTATCTCGTCTGGTATTTCTCGCT
TGATCGTCGTCGCGGGGAAGTCGGACGGGAAAGATTTCATGAGGTCATCTGTCGTGTTAT
CTTCAGGTTTAACGCACAGTTGCATCATAGTATCACCAATGTCTTTCTGTTCAACCTCTT
CCAATTCTGAACTTCCGCTGTCTGAATATTGGAGGTCTTCTTCCAAGCAGTTCTGATCTT
TACGTGGCCTGCCACGCTTTCTTGGAGTCGCACCATCAGATGTGGATGGTTTGTGTTTCC
TGGGTCGCCCTCGTCCCCGCTTCTCGTCCGTGTGCGGGAGGTCGTCGCCCTCTGGTTCAG
AATGTTGTGCGTCTTCGAGCATCTTCTGTTGCACTCGAACTATGTTCGCTTCTAATTGGC
TCACGTGCTCATCGAACTGTTCCAGTGCCTCTTGTGTAACTTTGAGCACGGCCTCGGCTT
GTCTCGTGAACTGTGAGTTGGGTCCGTTGTAGGCGCGACAGTTGTCCACCAACAGTTGTA
CGTCGCGCAGGAACTCCTCGCGACTGTGATATTATGGGCTTGAATTTTCTTTCCCATAGT
TTCCATGTCTATGGGATGTTTGATAACGCTGTAGTAATCCTTGACTTGTTTCTTGTTGAC
CGGCTTCAGGAACGGCCACGCTTCGGGCATCACTTTCAATTTGGTTGTTAGAAGATTTTC
GAATATGAATGACAGCGCCACCTGGTCATTATCATCAAGTAACGGATTGATTTGTTTCTC
GAGTTTCATCAACTGTTCTTCTTTTTCTGCCAACTTCTCGACGCAACGTTGTAACATTCT
ATGGGCGGCCACAGTTAAACTGCTTGTTGGACCATTATAAAGTGTACTATTCTCAACGAT
CTGGTTGACGTCGGCGAGGAACTCTTCACGACTCTGATAATGTTTCTGTCTGAGATTATC
TCGTATCGTTTGTAGATCCATGGGACGAGATACGATGCGGTAGTAATCAGCAACTAACTT
AGGATTGACGGGGAACAAGAAGGGCTGCACGTCGGGCAGGTGTCTCATGTGCGTGAGGAC
ATCCTCGAGTAGAGAGGAGAGTGTGACGAGCGGGTCGGTGCGGCGCCGGTCCGCGGGGCG
CCGCACCAGGTACTCGCACGGGTCCGCGGTGGCTCCGCGCCGCTTCCCGCGACCGAACTC
ACTCCCACGGCGGCCCCTACGTTTTAATTCTTCGGCAGTTTGCTTAATAATCTTGGTCGG
TAAGGTCAATTTAGTTCCCTCGACGTATCCGAGCTCGTCCTCGTCCGGTTCGAGGGGCGC
GGGGTCGGCGTCGGGCGGGGAGGGCGGGGAGGGGGGTCCGCCGGGCACGGAGCCCGTGTA
CAGCGGACACGCCTTGTTGGTCCGCATGTGGCCGACTTGTCCGCACGCGCCGCACTTTAG
TTTCAAGTCAGGTTTTAGTTTGGCGCGACGACGCGACGGCGTGTGCGAGTCTGGCTCTTG
TTTGATTTGACCGAGCGGTATTAAATTGCTTGTTGATGGACCGAGGTCAATATCGGTTCC
GGGAGCGGGTACAGTCACGTTACCGGCTAGCCTTTCTCTTTCCTGGTTACGTTTGATACG
TCTCAATTGTTCTTGTATTCTTCTCTTTTCTCTCTTCATCTCTTCTTTCTGTGTTTCATC
CATAGACGCAAACTGTCGTATGAACATGTCGTCTTTAGTGGACCGTATCTTGGTGTAGGC
TTCGATGACGGCCGCCTTCCGCACCAACTCCACCCGCGTGTATCGCTGGCCTGACGCGTC
ACGGAACGTGCGTACTATGCGGAGCACTCGTCCAGCTTGACTGGACGGTTGTTGTTGGTC
GGTTTGATTGATCTGCGGTTTCTTCTCAGATTGTCCCATTATCATTTTCCTTAGTTCCGC
TCTCTCGGCTTCTTCTCTTTCCATTGATAGCTGTTCTGTTGTCTTTTTGTTAGCCAACAT
ATTTTCGAGATTCTTGCCCATTTCTTCCAAATCAGACTCTTCACTGACTGAACTCTCAGC
TTCATCAGTACTCAGCACCTCAGTACTTTGCAGGACTCGATTCTGAAGCTCGAATATACG
CTGACATTCTTCTTTGTATCTTTCTTGATGTTCCGCGATAGAAAATCTGTTTCCTCTTGA
GAATTTAGTCATGCCTTCTTCGCCAGCTTTAGCTTTTTCAGTCGACAATGTTCTTACAAC
GTCGATGACTTCCCATCGCGATAATTTCTTGATCTCTTCTTCAGGAACACCAAACTTCCT
CAACAAAGCCTTAGCATTGTTCAAGCTGAGTCTCCTCAGGTCGGCGTCGGTTCCGGTGAC
GGTACGTTTAGGTTGTTGTTCCTCGTTGGGTTGTTGTGTCGGCTTGTTGGGCACGCGCAC
GTACGAGAACCCCTCCCCGCAGCCGGTGGGGTCGGCGGGGCCGGTCAGCTGCAGCAAGCA
CTTGCCGCGCATGGCTTGGATGTAGGCTCGGGTTGTGTTCCAAGGGGCCACTTTAACTTC
ATCATCTATTTTTAGTTGCATTTCTTCGTCATCGTCCTCTTGGGGGGTGAATAGAAACTT
TTCTCCGTACCCCGCATCCTTCAATCTCTGTTCTGCGGCCGCCATACTGAAGTAGGCGCA
GCACTGCTCTGGGGATACCATGGCGCGGATTTCTTCTTCGGATGGTAGTCGGAAATCTGG
CTTTATTACCCACCAATTTGAATCTAATCCAGTACGTTTGAAATCAGCACAAAGCTTTAA
TCTTTTTCTAATTGAACTTTCAGAATGCGATGGGAACGCCCTCTTTATGTCATCCATCTT
GATACGACGCGGTTTGTCGCGAGACTTCCAGAATAACCTATATATGAATACCTGTAAGAA
ATCTCGCACGAAATTGTTGGCTCTCTTCGAATTCGGACCCGGTACTTCATATAGTGGACA
TTCTTGACCAGCAACGTATAATGCGTCGACCTCTCGTATGTAATATGCCTGTCTAGTTCT
AATAATAAGGAAGTCAGTCTGCGACACCATGTGTTCGTATATAGGAGCTCTGTACATATT
GTTCTCGACGACAGGTTGCGTGGCTCCCGGCGCTAGGATCCCGAGGAACGGAGACGTGTG
AGCGTACGCTACTTCGCCGTATTTGAGGGGTTTAGGACCATTATCCTTAGTAGCAGTCCG
TTTGTAATAATTTTTCATCTTGGTACACATCCCGACTTGACTGAGCAGCGGTGGATGTTC
TTCACAAAATTCAACTAAGATAATTTCTCCGTCTCTACCGCTGAGGTCTTCGGGGGTCCT
CATGAAGAATACATCACCACCACCAGAGGCTAGCCTTTCTGCTTCACGTTGCTTAGCCTT
CTTCTTGATGTGTTTCAACAATGGTTGTACAGGATGTGGTCCAGGGGCAGCAAGCGGACC
GTAAGTGAGCTTCCTGAGCGCGGGTCGATGGAACGCACGCAGGCGAGCCGGTCCCATGTG
TGTTTGTATGAACGGCGCACGCAACTCTACCACCGGCGTACTGTGCTGTATGAGCTGACC
GCCTCCCACTTTGAGACGAGGATTCTGTGATTTCGGCTGGTAGAACACGTCATTGGATAT
GTTGAAGGGATCTCTATCGGGCGACTTGGGTGGCGGCGGTGGAGCGTCTTCTTGAAGCAC
ATTGATAACACCAGCCTTACCGAGCAAGATTTTGGATTTCTTAACGTGTGGATGTGGTAT
CTTAACTTTGGGGACTGGCCCTCGTTCTCTAGTTATCTTCGACGGATCCACATCGTCAGG
AATACCCAGTATAATATTTTCATCATTCGGATCCAATGTCAGTATTTTGGGTTTAGGTAT
TTTCGGCATATTTTCTGAATCCCATATAACTTCATCCTCCCAAGTACCGTACACTAACTC
TTCGTTTTCAACAGGGAATATACTGTACCAAGTATTGTCTTCGCCTTCAGCTGAATTTGC
TCCTGGTTGATTATTAGCAGAAGCTGCGGCAGCAGTCGTTTTAGACAAAGTAGTTGGTGG
TTGCGGTCGTGGGTGAGAAAACTGCTGTGCTGTCCGGCTTCCTGAAGTAGGTACCCAGCC
AGCTGCATTACTTTTACTATTCAAACGAGCCAGAACCTTATGTTTCATCTCACTTCCGTC
CCATATAACATCATCTTCCCACTGCAGTTGTGACAACATAAGGAAAGAGTCATCAGGGAA
TCCACTGTCAGGACTATCTACACTTTCCAGTTTTTCTCCCAAGTCTTCATCGCCTTCCTT
TTGTTTTTCTTCTCGCTCGGCTGCCTTTAACTTGAATCCATAATCAAAGCCATCCCCTGT
TTCAGGTACATTCAACATGTCATACCAAACTTGAGCTGGACCAAACCGCCAGTGAGCTGG
AGTTGGTCTTTGCATTTTATCTCCTGAAGCTGAACCCCTCTCATCATTAGACATTTG
(5217 bp)

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