SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36855_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		DEAD_box_ATP-dependent_RNA_helicase,_partial_[Papilio_polytes]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0010501 P RNA secondary structure unwinding
GO:0015030 C Cajal body
GO:0016020 C membrane
GO:0016607 C nuclear speck
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
Transcript
Level		FPKM:4.40 TPM:3.23
ORF EntryO_ErmoMG14612_internal:A_ErmoMG_comp36855_c0_seq2
Sequence
(Nucleotide)
CAAAACTTTATATCTAGCTTTGTTGATCACGTGGTGCGCTGACGTCTGCAGTTTGAGTAG
TTCTTCCTTGATGAGACGAGTTATTTCAGATTTGGCTTTAGCTACGGCTAACTCCTGCGA
GCTTTCTATAGCGAGGTAAAGTTTCCTTTCGCCTTCGGGAGGCGCCTTGCCGGTCGGAAC
ATATGTACCACGAACAGTTATACCGGCCTCGGAATACTCGCTGATGAGAGCTAAAGCCTC
CTTGCTAGTTACTCTCCATCTGGCTTGTTGTGGGAAGTCATTGATCTCCAGTTCAGTCTC
GTATTTACGGAACACCTCTTCAGTTGGCTCGTTGGA
(336 bp)

- SilkBase 1999-2023 -