SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36823_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_FACT_complex_subunit_spt16_isoform_X2_[Bombyx_mori]
Ontology
GO:0001672 P regulation of chromatin assembly or disassembly
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0022008 P neurogenesis
GO:0031491 F nucleosome binding
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035101 C FACT complex
Transcript
Level		FPKM:2.34 TPM:1.72
ORF EntryO_ErmoMG14500_5prime_partial:A_ErmoMG_comp36823_c0_seq1
Sequence
(Nucleotide)
CTTCTCTTCTAACACAGTCTAAAAAGAAAATAAAAAACATTGGTATCTTCTTGAAAGATG
ATGATGAAGATGAAGAAGAGGAAAAAGAAAACAAGACTGAAATACTCGAAAATGGAGGCA
GAGGCAAAAGGACCGCTGTAATAGAATCTAAATTACGAACGGAACATTCGTCGGAAGAAA
AACGTAAAGAGCATCAACGTGAACTTGCTGTAAGTCTCAATGAAAAAGCCAAGGAACGGT
TAGCGAAACAATCAACTGGTAAAGATACAGAGAAACTAAGGAAAAGTACAGTCTCGTACA
AAAGTGTTAGCCAAATGCCGCGCGAAAATGAAGTTAAAGAATTAAAATTGTATGTGGATC
GAAAATATGAAACAATAATTCTGCCTGTATTCGGCGTCCCTGTACCATTCCACATTTCCA
CCATCAAGAATATTTCACAATCAGTAGAAGGTGATTACACATACCTTAGGATAAATTTCT
TCCACCCCGGAGCCACTATGGGCAGAAATGAGGGTGGAAACTATTCACAACCCGATGCTA
CTTTCGTCAAGGAAGTAACATATAGAAGTACAAACACGAAAGAGCCCGGCGAAATATCAC
CCCCTTCATCGAACTTGAACACTGGATTTAGACTTATCAAAGAAGTACAGAAAAAATTCA
AAACACGAGAGGCAGAAGAACGCGAAAAGGAAGATTTAGTTAAACAAGACACCTTAATAT
TGTCGCAGAACAAAGGAAATCCTAAATTAAAAGATTTGTACATTCGTCCCAACATTGTCA
CAAAGAGAATGAGTGGTTCATTGGAAGCACACACTAATGGTTTTAGGTTCACATCCGTGC
GAGGTGACAAAGTGGACATATTATACAATAATATAAAGAATGCATTCTTCCAGCCCTGTG
ATGGAGAGATGATTATACTTTTACATTTCCATTTAAAACATGCTATTATGTTTGGTAAAA
AGAAACACGTTGACGTGCAGTTTTATACAGAAGTGGGTGAGATAACAACGGATTTAGGTA
AACATCAACACATGCACGACAGAGACGATCTCGCGGCCGAACAGAGCGAACGGGAGTTAC
GACACAAACTGAAGGTCGCCTTCAAGAGCTTCTGTGAGAGAGTCGAGAACATGACGAAGC
AGGAAGTCGAGTTCGATACACCCTTTAGAGAGCTTGGATTTCCAGGAGCCCCTTACAGAA
GTACAGTACTATTGCAACCTACTTCCGGCGCTCTGGTCAATCTCACTGAATGGCCGCCAT
TTGTTATTGCACTGGAAGATGTCGAATTAGTACATTTCGAAAGAGTTCAGTTCCATCTGA
AGAACTTTGACATGGTCTTTGTATTTAAGGATTACGCAAAGAAAGTGGCGATGGTCAATG
CCGTTCCTATGGACATGCTGGATCATGTTAAGGAATGGTTGAACTCTTGTGATATCCGTT
ATTCGGAAGGAATACAGTCCTTGAACTGGACCAAAGTGATGAAGACAATCACTGATGACA
TTGAAGGGTTCTTTGAAAATGGTGGATGGTCATTTTTGGATCCAGAGTCCGATGGTGAAA
ATGAGCAAGAGGAGGAAGATACGGAAGATGAAGATGAAGCGTACGAGCCAACTGATGCAG
AGTCTGATGAATCTGAGGGATCTGACTATGATTCAGAGGCGTCCGATGTCTCTGATGTTT
CAGGTGAAAGTGAAGAGGAAGATGAAGAGTCAGGCAAAGATTGGTCAGATTTAGAGCGAG
AAGCCGCTGAGGAAGACAAGAAAGATCGCAACTTTGATCGAGACGATTTCGACCGAAAAC
GCAAAGACAGAAACGCACAACGGTCTTACGAAGAAGAGGAAGGCGCTTCCAAGAAAAGCA
AGCACGACAAATCCAGTCATAAGAGTTCAAACCATAAGAGCTCTAGCTCAAATCACAAGA
GTTCGAGTTCACACCACAAGAGTTCAAGTTCGAACCACAAGAGTTCGAGTTCGAATCACA
AGAGCTCTAGCCACAAAAGCCCATCGAAAAGTAGCAGCAGTCCATCCAAAAACCGGGATA
AGCACCACAAATCTTCGAATCACGATCATCGTAAGAGCGACCACAAATCTTCAAGTAAAG
ATAAAGAAAAGAGACACTCTGGCGACCACAAGTCACACAAACGATCACGCGACGACAGCA
GAGAACGCGGGAACAGTTCGAAGAAAGCAAAAAAATAAAGAAAACTTAACGCAATGCTGT
AAGGAATCAAACGGGTTTCATTTAGCACAAGGCGCTTGTGTGTTAAATAATTACATATTG
TTATGTGATTGTGTTGTCTCATAATTTGTCCGTCTAATGTTAAGAAATCAGGTCTGAATG
TTTTGTATGTAAATTTGTTGATTTTGCAGTTTTGAATGTGACAGTAAAATTTTATTTTGA
AGAACCAGTGCCCCACTTACAACTAAATGGTTATTATTAAAAGTGAAATTGAGGATGATA
AATAA
(2465 bp)

- SilkBase 1999-2023 -