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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36799_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ATP-dependent_RNA_helicase_dbp2-like_[Amyelois_transitella]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003712 F transcription coregulator activity
GO:0003713 F transcription coactivator activity
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0030331 F estrogen receptor binding
GO:0043517 P positive regulation of DNA damage response, signal transduction by p53 class mediator
GO:0045667 P regulation of osteoblast differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048511 P rhythmic process
GO:0050681 F androgen receptor binding
GO:0060765 P regulation of androgen receptor signaling pathway
GO:0072332 P intrinsic apoptotic signaling pathway by p53 class mediator
GO:2001014 P regulation of skeletal muscle cell differentiation
Transcript
Level		FPKM:2.35 TPM:1.73
ORF EntryO_ErmoMG14428_5prime_partial:A_ErmoMG_comp36799_c0_seq4
Sequence
(Nucleotide)
TTACTCCTTTGCAGATTTTCGTAGTGGAAAAGCTCCTATACTTGTGGCTACTGACGTGGC
AGCTAGAGGCTTAGATGTTGATGATGTGAAATTTGTCATCAACTTTGATTATCCTAGTAA
CTCTGAAGATTATGTACATCGTATTGGAAGGACAGGGAGAACAAATAAAACTGGAACTGC
ATATACGTTCTTCACGCCCTCAAATGCCGCTAAGGCTTCAGATTTAATTTCTGTATTAAA
AGAAGCCAAACAAGTTGTAAATCCTAAATTACAAGAACTGTCGGAACAAAGAGGTGGCGG
TGGTGGTGGTCGACGTCATCGCGGGCGAGGTGGTCGGTATCGTCGCCGGCGTTCTCGCTC
TAGGTCTAGGTCGAGAAGACGCCGCTCTCGCACACGATCGCGCTCACGAGATCGTCGACG
CCGCCGCCATAGCTCATCGAGATCGTCCAGAAGTAAATCTTCAAGATCATCGAGAAGCCG
TTCGCGATCCCGATCTCGGTCCCGTAGTCGATCACGTTCAGGCAAGTGCAGTCCAGTGAA
GGATACTGTGGAGATAGCGCCCAAGCCGGCGCCTCAGGCATTGCTACCTACTCCCAAAAC
ACTCTTACCGACTCCCATTGGCCCACAGCTACCCGTTCCTGATAGATTTAATAACAGAGG
TCCACCAACTCCTTCGAAAAATGAAGTTCACTTTCCTAATAGAACTGACATGTCTGAAAA
TTGTATTGCTAATAACAGTAATCTCAATAATGTAAGTAATCAAAACCAAATGAATACACA
ACATCCACCGCCAACTCAGATACCACCTCTAATGGCTTTGAATCCCCAAATGAACATGTC
AATACCTCCACCCTCAATGACCAATCCACCTTTTGTAATGCCTTCTTTTTTCCCTGCCGA
CCAATATGGTATGATGGTCCCTAATTTCGGTCCTGGTCCCTGTCCCATGCTCCCTGCTGG
CGGCTGGTCTGCACCTCCTCCACCTCCTCCTCCTCCACCACCTTCCAATGTGGCCAATGG
GACTCACGGTCGAGGCTCAGGTCAGAGTGGCCTCGAGTTAGATTCCAGAAATCGCTTTGG
CTTTGGCAGCGGCGTTGCAGGGCCTCCTGCCTCCAGTGGAGGTCTCGGCTCAAGCAGTAG
TTTTGGAGCTGGAGGTGGCTTGGGCTCTAACGGCGGGCTCGGCTCTAGCGGTGGCCTCGG
ATCCGGCGGAGGCCTCGGTTCCGGCGGAGGCCTCGGAGCTGATAACGGCTACAGCGGAGG
CCTTGGTTCCGGAGGGGATCACAGCTCCGGAGGAGGCCTCGGCTCCGACTCTTCCGGATC
CCGGTCGAGAGGCCGAGACAGGCGCCGTCGTGGAAGAGGACGCGACAATGACAGTCTGAC
CTCTGGCGGCCTCGGGTCTCAAGGACTCGGAGGCTCTGAAGGCGGCGGCCTGGGTCAGTC
TTCTGGCTACGGACTCTCTGGCGGTCAAAGTATACCCCACGGGAGCCTACTGCCGCGCAT
GCTTCCCCAGAACGGTGATGATGCTAGGTCCAATGGTGCCAACTTCACTGCCTTTGGTTC
TTACGGACCCAAAAATAAATTGGTGACTGAACAAGGCGAACAAAATAATCAAAATTTTAA
TAATGGTGAACAAATCGGGCCTATGCAATATTATGGGCAGCAAAACTCTGGACCAGGAAG
GCCTCCTTACAGTATGATGCAGCCAGGTGTGAGTGATGCGCTGGCAAATGGCTCCATGGG
GTATAATGATCGCCAGAGGAATCGCCGACGGTGAACTTTAGAGAAAACGGTCACAATGGT
GATTCCCGTCGACGGAGGAGACGATAAACATCATCCATCATAAACATCGAAGTAGCGCAC
TACCGATTCAGTTTTACATTATAATTTCACTTTGTGTTGTGTCTAATTGATGTCGATGAA
CAATAATATCGTTTCTTAATTTTCCAATTGTATAATAAACGATCATATTTTAAATATGAC
GATTAAGACAACATTGTAATCATTATACGTCTCTTATGTGGGTATATTACGATAAAAGCC
ACTAATTTGATGTAATATAAAAACTTTAAAAATTACAAATTTTATCTTTGTTCAACATTT
ACAAAAACAACCATATGTGGATTTCATCAAGACACATTTGAGTTCATCTCTAGCGGAACT
CAACGCAACATGCAGTGTAATCGATAAGATTGACGCGTCCCTCGTTTAATACGATGTTCG
TAATAGTATCATCCCAATTTATTTTAGAGGTCATTATTAATTAAGCCTTAAGTCTAAATA
ACAATTAAGAAATCCCAGGATTACCAAACTTTTGCCTATAACAATAAGGTTATCGTGAAT
TAGCTATAATAAGGTATATTATATTTACAATAGGACTTTTTGTAAACAAAAATAAGTAAC
CGTAATGCACCGTCCACAGTTTTAGTGCAAACAGTAACTTTCATTACATTTTCCTTGTTA
AATTAAATAAACAAAAATAATTGTTTAATTCAGTTATTCCCGGATATTAGCGTTTGGTAG
ACTTTTGAGCAATATGCGTTATTTTTTCATGAAATTCAATCCTAAATTTCAAAAGCAAAA
AATCAGTTTTTTTATTGAAAATGTTAAAACATACTTTTTAAAGTCAACCACCAGTTCCAA
AAAGTACCCTCTCACTGAGAAGAACTGACGAAACAAACTC
(2680 bp)

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