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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36759_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_putative_U5_small_nuclear_ribonucleoprotein_200_kDa_helicase_[Papilio_polytes]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003724 F RNA helicase activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0007067 P mitotic cell cycle
GO:0007419 P ventral cord development
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:6.00 TPM:4.41
ORF EntryO_ErmoMG14255_internal:A_ErmoMG_comp36759_c1_seq1
Sequence
(Nucleotide)
GGCGTGTCTGCGGATAGCGTTGTATATAGGCTTGGTCATGGCCGCCAGTCGGGTCGGCGC
GTGCGATATGTTGAAGCCCTGTATGTGTAGTTCGAGCGGCAGCGGTCTGACGCTCGGGTG
GAAGTTGAAGGTGGCGTTAGCGTTACAGCCGAGCCACTGAGCGACGTCGCGCGCGTCTGC
TAGCGGCAACGACAACGCCAATATACGTATCGGTTTACCGGTTTGAGACGCGATGTATCT
CATCCTGGAGCTGACGACCTCAAGCACCGGTCCCTCCTCGCCCCCGAGGAGCTGCAGAGC
GTCCACTATCAGCAGGGAGACACTTTGAACGCTCTTACGGACTTTCCACCTCCGCGACAA
TATATCCCATTTATCGGCCGTGGTTATGATTATCTGTCCCTTGTTCAGCAGCTTGTGGTC
GGTGGCCGTCTCCCCAGTTAACTGGACGACCTTCAAATTAAACTTGGTCCCGAAGTTGTG
GTAGCAGTGCGCGAACACGATGTCGGCGAGTGCGTCCTTGGGCAGCAGGTAGACGGCCCT
GCCGTTGGGGTTGTGCGTGAGCATCCGCAGCAGCGCCAGCTCCGCTATCAGCGACTTGCC
GGAGCCGGAGGGCGCGCCCACGAACACGTTGTCGTCAGTGTTGTACACCGCGTTGAACAC
CTGAGTCTGTACGGGGTTGAACTGCGGGAACGTTTCATTGTACAGGTCTTCGTATTTGGA
GTTCCTGAGCGCGGATATCGGCAGCGGCTGCAGGTCCAGCAACTCCGTCGGGGGGAGATT
CTTCTCAGGTAGGATGAGATGTCTGAACGACACCGGCAGCTGGGTCTCCGCCGCTATCCA
CCTGTCGGAGACGACCCTGAGGAAGTACTGCGGAGGGAGGGGTTCGAACACCGGCACGAA
CAGCTTCACCTGATGCTCGTCCCTACAATACTTCTGCTTCAGGAGGAAGTATTCGTGGTG
GAGTATCACTTCGGAATCCACATCTTCTACTAAGATCCAGAATGCTTCGGATTGTCCGTG
GATCTTCTCGTCCCAGTGGAAGTCCGGTGTGATGGTAAGCTCGACCCGGAGCGTGGAGCG
GGTGATGGGCTGTATGTGTGTTGCCAGCTCCAGTTTCGGGAACTGGTGGACGTATTTGTG
GAGCATTTTCCCCAATTTGGGGACCCGGACCAGTTCTCCGATTTCGTTCGGCCCTAGTTC
GTACAGTTTCTCCCAGGGGAAGTTTTTCTTTTCGAGTTTTTTGATGATCTCTTCGGGCAT
TTTCTTGAATTGTCTCAAAGGCGACATCGACTGCCACATTCTGCGATCGACCATCTTGCA
GAGCGCCAACGTTTTGTCGACTAACTGCGCCCAACCTCGATACAGCACGATCTCGAATAT
AGCCCTCAGCAGCCGACAGGCGGACTGCGTCACGTACACCATGTCCGCCATTAGCGCGAA
CCCTTCCAGCTTCAACTGCGATATATAAGCTTGCAGCAACACGTTAATCTTGGCCGATGG
CTCTTCGATGCTCTCCTTGATCGGTATCGGAACCCTCTCCATGAGCTTGTGCAGCTCCAG
CTTCTCCTCCTCGCGCACGGCGACGTGCTTGAACTCCGCGGAGAGCGAGAACACGCGGAA
CAGCTCGATCTCGCCGAGGGTCGGCTTCAGGAGCTGGTTGTAGGACTGCATCGTCTCGAA
CGTGCAGTAGAAGTGCGACGCTATCCGACCCAGCTCCGTCGGCTGGAAGTGACCGGATTT
CTTCTCGTATTTTATAAGACCAGCTTTGTCCAGTAGACTAGCGGCGGTGTGTACTAAGTC
AGCCCGATGCAGCTCCAACAGATTATCTTCTTGCATCTTGTCCGGAGACACTCCGTACAG
AGCGGGCTGTCTCAGCATCCGTATGTACAGATATGTGTAGCCGAGCCACGTGACAGCATC
CCGCACGCTCTGCACGGAGCCGAGCACGATCTCTGCGTTGAGCATGTCCGGCAGCTTGCT
GATCAGCTGCGACTCGATGGGCAGCTGCTGGTTCAGCAGCGACAGGTAGTACTGGAGCTC
AGAGTGATTCGTTATCAGGATACCTTCTCCCTTAGTGTCGTACTGGGGCCGCCCAGCCCT
GCCCAGCATCTGCAGCACGTCCAGCGCGCCCAGCTCCGTCCAGCGGCCCTTCTCCGGGCA
GTACACCTGCGTGCCCTTCACGATGACGGTGTGCGCGGGCAGGTTCACCCCCCACGCCAG
CGTGGCCGTCGACACCAGCACCTGTATGTGTCTGTCAGCGAACAGGTCCTCCACCAGCGT
CCGGTCGACTCTGCTCATGCCGGCGTGATGTATGGCGAAGCTGTACGGCAACAGCTCCCT
CAGCTCAGGGTTCTTCACCTGCTCGGCTTCTGTTCTAAGGACTTCCATGCTCGCTGAACC
CTCCCTCAGGAAGTGTCCGAGCGTGTCCTTCTCGAGGCACATGTCCCTGATGGCGCGCGC
CGTCTTACCGGTCTCCTTACGAGAATGAACGAACACTAATATCTGATTCTTGCCGGCGTG
CTCCAATATCTTCTCGTACACAATATCGTTCATGACCTGGAATCGTTTCAGAGCTTTCTT
CTCCGTCACACCGATGTACTGCTGTTCCAAGGCCACGGGTCTGAATGAATTATCAAAATA
AAATAGTCCTTTTTCAGGTCGAACTCGTAAGAAGGTAGCGACGTCTGTGTAGTTGGGTAA
TGTGGCTGATAGACCAACCAAACGTACCTCCTCCCTGGTCTGCTCCACGGTGCGCAGTGT
CCTGGCGACCAGCGCCTCCAGCACGGGGCCGCGCTCGTCGTGCAGCAGGTGCACTTCGTC
TATGATGATAAGCCGAACTAGATTCGTGAACGAACGCTCTCCGCCTTTCCTAGTAATAAT
ATCCCACTTCTCAGGCGTACACACGATCAGCTGAGTGGCTTCTATCTGCTCTCTGGTGAG
CTGGTGGTCGCCCGTCAGCTCCGACACCTTCATGTTGTAGGCCGCGAGGCGCTTACTGAA
GTTACCGACCATTTCCTGCACAAGCGACCTCATGGGCGCGACGTAGATCATCTTAAAGTC
GTTGACGTTGACGGTGCCGTCATCGTTGACGTGCTTGCCGACCTCGCGCAGTATGCAGAG
CAGGGCCACGTTGGTCTTGCCGGCCCCAGTTGGGGCGCACACTAGGAGGTTCTCGTCCGT
CTCTAGGGCCGACTTCGATATGCGACTCTGTATTCTGTTCAAAGTTTTGAATCCTTCGAA
TGCTGGCTGCACGTATTTGGGCAGTTTGTCTATGGGAGTCAACGTCTCGTTCTCGTCGAA
GGGCTTCGGCTTCAGGGCTGGTACGTGGACTTCTTCGTAACCCTTCCTCTGCTTCCGGAA
GGAGCCGGGCGGCAGCTGGCAGCGCTTGTTGGCCATGAAGTGCGAGCCCGCCGCGAACAC
CAGCTCCTCCAGCTGCACCACGCGGCGACTCCCCGCCACCTGCCCCCCGCCCGCGCCCGC
GC
(3482 bp)

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