SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36751_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA_polymerase-associated_protein_Rtf1_[Papilio_xuthus]
Ontology
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0007219 P Notch signaling pathway
GO:0016570 P histone modification
GO:0016593 C Cdc73/Paf1 complex
GO:0035327 C euchromatin
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0045747 P positive regulation of Notch signaling pathway
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051568 P histone H3-K4 methylation
GO:0051571 P positive regulation of histone H3-K4 methylation
Transcript
Level		FPKM:3.77 TPM:2.77
ORF EntryO_ErmoMG14215_complete:A_ErmoMG_comp36751_c0_seq1
Sequence
(Nucleotide)
GGAAAATCCAAGCAGACGCATTTTGTGATCGTTTTAGCGTAGAATTCATTCAAAATGGCT
AAAAGAAAGAATAAGCCGTTGATCGATTCAGATTCAAGCAGCGAGTGCTCAGATTTAGAG
TCCCAACTACTAAATTTAGCCAAAAAGAAAAAGAAGACAGATTCCGAGCCGTCCCCGAAG
CCGAGGAGCAGGTCCTCTGGTAAATCATCAGACAGTGACTCGGATGATGATGACAAACGT
AATAACTCTAAATCATCATCATCGTCGGACTCCGATTCAGAGAGCGACGCCAAAAGTGAC
ACATCCAAAAGGGATTCTCCAAGGAGAGCATCTTCGGATGAGGAGTCGAAAGATGCTGAA
CCGAAGAGGCCTGAGATCAGAAAAAGTACGGAGAGTGCTGGATCGGAGAAGAAGAAGGAG
ACATTCAGTGAACCGGAAGAAGGTGAAGTGTCATCTCACTCATCAGACAATGATTCGTTA
GACTCAGAACAAGAATTTGATGACGGTTATGATGATAATCTCATGGGTGATGAAGAGGAT
AGAGCCCGTCTGGCCGCCATGTCTGAAAAGGAGAGAGAACAAGAGATCTTCAAACGTATA
GAGAGAAGAGATCTGATGAAAACTAGATGGGAGATAGAACGAAAACTTCGGTTAGCAAGA
CGTTCTGCAGCAGAACGATCTGCATCTCCAGGTGAAATAGCGAGGAGAAGAGAGGCCAGG
AAACGTAGGAGAGCCATGAGGGAACAGAGACATAACGAGAGGGAGAAAGAAAGAGAAAGG
CAAAGACAAGCTGCCGAAGCGGAGGCAGAGAAAGAGAAGGACAAAGAGAAAGAGATACAG
AATGAGCCAGAGGAAGCTGCTCCCAGTCCTGTGGAAATACTTGATGATAATAAGGAGGAT
ATTGAGCCGTCGGAGCGCTCGGCGTCACCGCTGTTCGGGTCCAAGACGGAGCGCAAGCGC
GCCGTCGACGACAAGCGGCAGAGCGCCATGGCGGCGCTGCGGGCCCAGCGCGCCTCCCGC
GTGCTGCGCGCGCCCGCTGATGCGGAGGCGGAGTTATTGGGCGGCTCCAGCAAACAGAGC
GTCAAACTGAAGGCATCCGACATCTACTCCGACGACTCCGGCTCCGACTCCGACGACAAC
AAATCAGCTCGTAGAAGTTCAACCAGTTCTTACCAGTCCGGGGCCGAGGAGGAGCCGAGA
AGGGAGAGCAAACAGAGAGAGGTGGAGATCAAGTACGCAGACTCCAGGGAACAGATCAAC
AAACTACGACTCAGCAGATTCAAACTGGAGAAACTAGTTCACCTGCCGTTCTTCACCCGC
GTAGTGACGGGCTGCTTCGTTAGAATAGGAATAGGGAACAACAACGGCAATCCTGTATAC
AGGGTGGCAGAAATTATTGACGTCCACGAAACCGGTAAAGTTTATAATCTCGGCAACACG
AGAACTAATAAGGGTTTTAAATTACGTCACGGAACACAAGATAGAGCTTTCAGACTGGAA
TTTGTCAGTAATCAGGAATTCACGGACGGAGAGTTCCAGAAATGGTTCAAAGCTTTGAGA
GACGCCAACAAGAAGCCGCCCACGATGGATTTTGTCAGAAATAAAATCAATGAAGTTAAA
CAGGCTTTAATGTACGAGTTTAAGGAAGAAGATGTGGAGAAGATAGTGGCAGAGAAAGAT
AGATTCCGTTCCCATCCGACCAACTATGCTATGAAGAAGACTCAGCTCATGAAAGAGAGA
GATGTCGCTCAGTTGAGGGGCGATGATGAATTGGTGATGGATCTAAACTCCAAGATCGAG
GAGCTGGAGGAGCGAGCCAGCCAACTCGACAAGACCAGGACCTCCTCTATACAGAGTATC
TCTTACATCAACAACAGGAACCGGAAACTGAACGTGGAGACGGCGGAGAAGGCCATCATG
GAGGAAGTGAAAGCGAATAAAGGGAAGAAAACGGATGATCCCTTCACGAGACGTCACACG
AAGCCCGTTATGAACTTCAAATCGAATAACAGGACACAGGAGTTAATAATTAATCAACAA
GCGGCAGCCGTCGAAGAACAAATGCTGAAAGAAGAGGAGAGGATAGAGAAGGAGAAACTG
GAGAGAGATAGACTTGAAAATCACGAGGAAGCAAAAAGAAGTAGAGGGGACAACAACCCA
ACAACAACAGACTCTAGTTTATATTCACTACACGACTTCGATATCAGCATAGACTTAGAT
TTACCTGTTTCAAAATCTGTATCGAGTCAACCGAAGCAGGTGAGTACTAAAGTGAAGGAG
ACCGGACCCAAGCGGTCACTCAACCTTGAAGAGTACAAGAAGAGGCACGGACTCATTTGA
GGTCCACTTTATATTATAATTAACGTTAATTAACGTGACTTTAATAAATTAAGGGCTTAC
TCAGAGACATCTTATATTGTCTTAAACCAATGGCGTGTATGTTGGGTATACATATAATAA
AATTGTAATTTATGTATGTATATTACATATATTTAAACAAAAATCACACAAGCTATTAAT
AAAGCAAAAGCACTCAAACAGCTATTTCATAGCTTCTATCGCGGGCCTTGGGACTGGAGA
CCGAATCCAGAAATTCCG
(2598 bp)

- SilkBase 1999-2023 -