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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36717_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_TRIP12_isoform_X4_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0009790 P embryo development
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046966 F thyroid hormone receptor binding
GO:1901315 P negative regulation of histone H2A K63-linked ubiquitination
GO:2000780 P negative regulation of double-strand break repair
Transcript
Level		FPKM:17.92 TPM:13.19
ORF EntryO_ErmoMG14099_5prime_partial:A_ErmoMG_comp36717_c0_seq1
Sequence
(Nucleotide)
GCGCGCTGGAGCAGCTGGGTGCGCTCGCCGCCGCACTGCCGCACGCCGCGCACGCACGCA
CCGCACTCGCGCATCTCAGGGACACGCTGCTGCACCATGACGTCTCGCCATTCGAGGTAA
ATCATTCCGGAGTGCTCGGCGCCCTGCATCAGTACCTGACTGGTTACGACCTGGACGCAG
AAGGTGCCGAGAAGCGCGAGGGCGATGCGCAGGCGCAGGAGACTCCTGATCTGGTGCAGG
CGTGTGAAGAGCGACTACGACTCTTCTTACACGTGTTCGCTGAAATGCCCATTGAACCTC
AAATGAACGATTGGAAGGAGTCTATAGGCAACAGCACGGCCCTGTGCGCCTTGGTGGCCA
AGGTGAACGCGTGCGTGTCACACCTCGAACAGTTCCCCGTGAGGGTGCACGACCTGCCCG
CGCGCCCCGCCACCTCCGCTCTCAAGTTCTTCAACACTCATCAACTCATGTGTGATCTCA
AACGCCATCCTACATGTAACACTTTGAAGCAATGGAAGGGTGGTGTAGTACGAATAGACC
CATTAGCCTTAGTTCAAGCCATCGAGAGATACCTGGCGCAGCGCGGGTACGCCCAGGGAC
GCACGCGGTCGGACTCGGCCGGCGCGCACTCCGACGACGAGCCCGCCTCCGACGACGACG
TGGAGGACGCACTGCCCGCACCGCCGCAACCCACCATCGATTCTGAACATAAACTCGAGT
TCATGATCGGCGATACAGTTTTGCCATACAATATGACCGTCTATCAAGCGGTGCGACAAT
TTGGCGAACAAAATGACGCCGACACCGATACTGAAACTCCATTGGCCAACGCAGGGATAT
GGGTCCAAACACATACAATATTCTATCGTGCTGTGGAGCCAAACGATCAGCCGCGCAATG
AAAGCACACCATCGAAGAAAGGCAAAGGCCAACCTACAAAGATCTCATCTAGACGAAAAC
CAGATTTACTGTGGAACGAGGGCGTAGTCCCGTGCCGGTCGTCGCCGCTGGTGGAGCAGG
TGCGGCGCCGGCTGGTGGCGGAGGGCGAGGTGCGCGACGCGTCCCTGCCCGCGCTGGCCG
TGCTGCGAGCTCTGCACGCGCTCTCCCGGCACTGGCACGCGCTCTACACCGCCGCCTGCC
TGCCCGACCACGCGCCGCTAGTGCCCCATGCCGACTTCATCAACGCCAAGCTCGCAGCCA
AAGCCAATCGACAGTTGCAAGACCCATTAGTAATAATGACAGGAAATCTTCCGCCGTGGT
TAAAGAAAATAGCTTATGCGTGCCCATTCGTGTTGCCGTTCGAGTGTCGTCACCTGTTGT
TCTACGTGGTGTCGTTCGACCGCGACCGCGCGCTGCAACGTCTCCTGGAGGCGGGCGGGG
AGCGCGGCGGCGTGGCGGGGGGCGCGGCCGGCGGGGAGACCGAGCGTGTGGCGCCGCGTC
TCGACCGACGCAAGCGCACTGTGCAGCGACAAAACGTGCTGCGACAAGCCGAACAGGTCA
TGCACGAGTTCGCGCACACCAAGGCTCTCCTCGAGATACAGTACGAGAACGAGGTCGGCA
CCGGACTTGGACCCACCCTCGAGTTCTACGCGCTCGTCTCGCAACAGTTGCAACGTGCCG
ATCTCGATCTCTGGCACGGCAGCGAAAATTTCAAACAGAAACCCAGCTCGTTTGGAGGAG
AAATTGTCAAATCTGGCGAAGCGGCCGCACGCTTAGCCACTTCTGTTCGCGACGGCTTGA
ATCTAGATGAAGAACGTACGCGAGCCTCCTCGCCGACGGATCGTGATAAGGATGCCCCCG
AACCCGCCGCCTTTGTCTCATGGCCATGCGGTCTGTTCCCGCAGGCGCTAGGTCGGAACG
CCCGCGCTTCACATCTTTCACGAGTGAAAGCCAAATTTCGGTTCCTCGGAAAGTTTATGG
CCAAGGCAGTCATGGATTCTCGAATGGTGGACATTCCGCTGTCGGTAACAATGTACCGTT
GGGTGATAAGCGAAGACCGTTGGCTAACTCTAAGCGACGTGCGACACGTAGCACCAGAAC
TATGGCGCTCCTTGTGCCGCTTGCGACGTGTCGCCGACCGCGCGCTACACATCGCCGCTG
ACACACGACACACTCAAGAACAGAAAAATCAGCTTATAACTAATCTTGAGCTTGATGGGT
GTCCAATTGAAGAACTTGGGCTCGATTTTATTCTCCCAGGCGATGGATGCACAGAATTAC
GTCGGGGTGGCAGAGATATGCCTGTTACAGCCCACAATTTACAAAATTATATTGATCTCG
TAACTCATTGGTTGTTGTATGAAGGTGTAACAAAGCAGATGGACGCTTTTAGAGAAGGAT
TTGAGTCAGTATTTCCTTTAAGCAATCTAAAAATCTTCTATCCTGAAGAGTTGGAACAAG
TTTTTTGTGGAAGTCCCTCAGGTGGCCGTGATCAACGTTGGGATCCCCGCTTGCTTGCTG
AGTGCATTCGACCAGATCATGGATACAATGCAGAATCTCGTGCTATACGCATGCTTATTG
ATATTTTGGCTTCATACAATCGTGAAGAACAAAGACTATTCTTGCAATTTGTTACGGGAA
GCCCTCGTTTGCCGACTGGCGGTTTCAAAGCTCTTAATCCACCGTTAACTGTGGTGCGTA
AATCGCTGGAATCTTGTCTGGATCCGGATGAGTATCTGCCGTCTGTGATGACATGCGTCA
ACTACTTGAAGCTCCCCGACTACAGCAGCGCAGAGGTGATGCGCGCCAAGTTACGGCTCG
CTGCCTCCGAGGGCCAACACTCGTTCCATCTGTCGTAAACGGCCCGTTTCCTCTTTACTG
TGATTATATTATCGGCCCCCTTTGTATACACGTGTGAATGCGGTTAGTGATATCTTATTG
TAA
(2883 bp)

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