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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36654_c1_seq2
Scaffold_id
NCBI non-redundant
(nr)		putative_conserved_plasma_membrane_protein_[Operophtera_brumata]
Ontology
GO:0005319 F lipid transporter activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0006897 P endocytosis
GO:0006914 P autophagy
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0007628 P adult walking behavior
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016242 P negative regulation of macroautophagy
GO:0030301 P cholesterol transport
GO:0031579 P membrane raft organization
GO:0031902 C late endosome membrane
GO:0031982 C vesicle
GO:0033344 P cholesterol efflux
GO:0042493 P response to xenobiotic stimulus
GO:0042632 P cholesterol homeostasis
GO:0045121 C membrane raft
GO:0046686 P response to cadmium ion
GO:0046718 P viral entry into host cell
GO:0048471 C perinuclear region of cytoplasm
GO:0060548 P negative regulation of cell death
GO:0070062 C extracellular exosome
GO:0071383 P cellular response to steroid hormone stimulus
GO:0071404 P cellular response to low-density lipoprotein particle stimulus
GO:0090150 P establishment of protein localization to membrane
GO:2000189 P cholesterol homeostasis
Transcript
Level		FPKM:4.60 TPM:3.38
ORF EntryO_ErmoMG13873_3prime_partial:A_ErmoMG_comp36654_c1_seq2
Sequence
(Nucleotide)
TCAATTCGTACTGACGATTCCGAGAGTCAACTGTGTGATCTTTTAATTTGTACGAACCGG
GTCCTATTAGAGACAGAATTACTGGCAAAAAAACTAAGCCGTTGAAAAGACCAAACAATA
TAACTAGAAGAAAGATTTTGAAAAATGATTGGAACGTGTAGGCTTTTGACATACTGAGTA
AAGAGAGAGACAACAGAGTGGATCCACCGCCTAAAAGTACCGCTGTTCCGATTGACGTTA
CGGTTTTGAATGCTCTTTCATGCCGCGATCCTTCCTGGATTGTCAGAAACGTATGTCCTA
CATGTGCTGCGTAATCGACGCATAGTCCAATTGCCAATTCAAGACCAATACAACAAACTA
TATCTACTGTCATTCCCCACCTTTGCATCCATCCCAAAACATTTAGAACTGTCAATAGAA
CACAAATAAATATCCAAAAGCACATTTGGAGATTTGTTATTAATATTATTGTACAAATCA
TAACACAAATCAATGCCAGTTCAATATTTCTCTCAACTTCAGTGGCAATTATTTCATCGG
TCACCCAATTCCCGAATACTTTTGACCAAACACTGCTATAATCTATATCAGTGATTTCAG
ATGTTTTTGCAATTCTCTTAACTTCATTCATAGCGGGAATATATTCTTCAGGACCATTAA
ACTTTGAGAACTTAAATCCAATTGTAGTGGCCTGAATTGGAGGTGCTGCTACGCCACATG
ACAAATTTTCAAGGAATTTAAAGTTGTGCAGAAACTTACCTCCCACAGGACTAAATAGAA
ATCTCGATAAATAATTATTAAATTCACTCTCTGACACTGAAGACGTGTTCTTTAAATCTT
TCTTGTAATTTATTAATACATACTTATGAAAATATTCAGTCCAACTATCAAATTCTCTGA
CATACGATTTCTTTGTTAGTCTTTCCATCATGCTACATAATGCCGGAAACTCTTTGCTGT
AATTCATTTTTCCAAGAAGCACCATTGCGTCATTACCATTTTCAGGGTAATAATAATCAT
GAGTATTCAGGTACTGCTTGTAATAAGTGTCGTCTGGTATGAACCATTTCGGATCAAATC
GTTGTTCCAATTTTAAGATGGCCTGTATACTAAATGCTGTTACTATTACTGTGAATAATA
ATACAATTATTTTTCCCGGAATAGTTAAAATAACATTTTTATAAACAGATTCAAATGTTG
TTCTCAAAAAATTCTGTTTTGTTGAAATTTCTATTTGTTTCTTATGTTGATAGCAAAAAA
GTAAACCATTACGATTATCTTCGATTCGCATTACATCTAATGTAAAGACTGCTACATAAA
ACGTTACAGAAAAACAAAATATAAAAAATACGCCAGCTGCTGCGTATAAACAAAAAGATT
TAAGTGACGGAAGTATAGTTATAGCACCAATGAGTAAAGCCACAATATCCGTAAAGGAAG
TTATAACAATTGACACACCAGCGTGCTTTAGCATCAAGCCTATTTTAACAGAGAGACTCT
TGCGTACTTCATTTTCAGATAAATTTTTCCAACAGGCTTTCATGACGAACATATCATCTA
CACCAAGACCCATCAAAAGAAATGGCAACGATGAATGAACTGGACCAAACGAAATACCCA
TAATCGAACACCAACTAACAGCTGATATGTATGCTAAACCTACACATAACAAACCTACAC
TACCGAGCGTTAATCTTATTTCTAACCAATTAAAACGAGAAAGAGCAAATTGTAAATAAA
CGAACATTAGTAGTATTCCTATAAATAGTTTGTCTAAATCATGGAACATACTCTCTCCGC
TAACATCAGCGAAACTCCTGCCCGCTTCGTAAAATATTTTGAAAGATGTTGTATTCAAAG
AAATGTCTTCTAACGTTTTTAAAAACTGACTTTCCCAGTACGCTAATGGAACAGATACCC
AGTCTTCTGTACCAACCAAGTTACCTACTTGATCTAGATTGACGTCTGACATATTTACAT
GTGTAAACAATGTTAATAGTACAGATTTGGCAGAAACAATATCACCTCTCTCATCGTACT
CTAAACCTCCTAGTATTTTGGTGTAATCAAAAGGATGACCGGTCACAGGGTTGATCTTGA
CAGAATTAATTTTCTCTATAATATCTTGCTTATTCATACTTCGTATTGTATTAAGATCAT
TCTTCCATATGTCTAATAAATTATATTGGAGACAAGTTTGTTCAAATTCTTCTAAGAAAT
TGCAATAGAATTGACTATCGACCCATAAGGTCGGGTCTTCATAAGTACTGTCACTGTTAT
CACTACCACTACTGTTTGTTTTATCACTGATTTCTTTAGACGGAGCACTGAATGTTGAAC
CAAAAAAAATTACGACAGGAACTTTGTAACACAAATCTTTAAGATTAACTATCTGATTTT
CATAGTTAATTTTTAAATCAATTAACTTAGTAGTAATATCGTTCATTTTAATGAGTATAT
CTGGTTCCAGAACATCATCTGCAGTGAAAATTACGTTTTGCAACCGAACTCCTATTCCGA
ATGATTTGATATACCAGTTCGTATCGTAATAAAAATCTGAATCTGGCGGTACCCATAAGT
TCATAGGATTCTTTTCTATACGGAACCTCATCAAGCCGATAGCGCTCACGCCGACAAATG
CAAAGGTCCCAAATATGACTCGCCATGGATGATTTGCCACAAAAACTCCGAGTGAAAAAA
ATATACTCTCCACAAAATGCACTGATACAGATGACACTGCCTCCCACATTTGTTGTATCG
TCCTTTTATTCCCTTTTCCTGGCATTTTATTATCGTATCGTAACTTATTTATTAATTTTT
ACACAATTAATTTTGTGTCATTTCTGCTTTACAGGTTATACTATCACATTATAATAACAA
GTGTTCACTTGTGCACAGTACGCGATTTAATATTATTATTGTGAGTCAGTAACGTCGGAC
GCTCGCCGTGGCATGAACAAGCGGCGGGC
(2969 bp)

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