SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36635_c1_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_WD_repeat_domain_phosphoinositide-interacting_protein_2_isoform_X3_[Amyelois_transitella]
Ontology
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0000422 P autophagy of mitochondrion
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0006497 P protein lipidation
GO:0006914 P autophagy
GO:0008150 P biological_process
GO:0010314 F phosphatidylinositol-5-phosphate binding
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0034045 C phagophore assembly site membrane
GO:0034497 P protein localization to phagophore assembly site
GO:0043234 C protein-containing complex
GO:0044804 P autophagy of nucleus
GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
Transcript
Level		FPKM:4.10 TPM:3.02
ORF EntryO_ErmoMG13814_5prime_partial:A_ErmoMG_comp36635_c1_seq2
Sequence
(Nucleotide)
TGTATATGTACACTAAAACAGTACAAATAAAATGCATCATAAATGCTGACAAATCAGGGA
ATGTTTGCAAAGAGCAGAGTGAGACCAAGCAACACTAGGGTGATCTATTCACCGATTGCA
ATGCAGTCATTATATTGCATTAATATAATTGAATTATGTAGAAAACTACAAATGATATGA
CTATTTTGAATATTATAAAACACTAGAGGAGGTTGTCGAATGATCACTGACTAATATTCC
AATACCGAAGCTAAGGGATGATGCGGGGTTAAAGTAAAAGAAAAAATCTTATTAATGTAA
AATTAAAAACTATATTAAAAATAAAATTCGTTACAAATTATTATCACAATATTTACATGA
AATGTCCATTAAAGTGAGCAAATTATAATTATTCGCGATAACACATGTATAGGGACGATA
CATCAGTACATAGTCCGTCGAAGCCGGAATGGTAATATCTGAGAGTTACGGTGTGTGGCG
GTCAGTCGCGTCGCTCCTCCTCGCGCGCCTCGCCTGGCGGCGGGTCGGCGTCGCCGGCGT
CGTCCGCCGAGAGGAAGCGGTGGTGCCGCAGCAGCGGACACTCGCCGCCCTCCGCCGCGT
CCAGCCCGTACACGTACAGCACGCCGGCCGACGTCGCCACCAGCAGCCGCGGACTGCGCG
ACACGCGTGTGACGGCGGCGACAGCCCGGTGTCCGGTGGCGGGCAGGCGCGCGGCTGCGA
AGGCGCGGCCCTGGGACAGCACGTCAGTCACGTGCGTCGGCAGGTAGCCCGCTCCCGCCG
ACACCGCCGCTGACAGCCAGCCCAGCCACGAGTCCGCCTCGGCTCCCGCCGCCCCCGCCC
CACCCGCCTCGCCG
(854 bp)

- SilkBase 1999-2023 -