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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36627_c2_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_splicing_factor_3B_subunit_1_isoform_X1_[Papilio_xuthus]
Ontology
GO:0000245 P spliceosomal complex assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0000785 C chromatin
GO:0001825 P blastocyst formation
GO:0003682 F chromatin binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005686 C U2 snRNP
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0009952 P anterior/posterior pattern specification
GO:0016363 C nuclear matrix
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0034693 C U11/U12 snRNP
GO:0044822 F RNA binding
GO:0071004 C U2-type prespliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:0.00 TPM:0.00
ORF EntryO_ErmoMG13791_3prime_partial:A_ErmoMG_comp36627_c2_seq4
Sequence
(Nucleotide)
GCGCGTCCTCCGGCTTCAGCAGCTTTGCACATAGGTGGCGTACCGTTCTTAATTTTCAAG
AGAAGCTTCATAATCTTCCGTTCTTTAAGTTCGTCGGGTGAGAGCGTGTCTTCGTCGACG
TCGATGAGCAGTTTGTCGAAGTACTGCGCGTCCTCCGGCTTCATGAAGGGCAGCTGCTGG
TTACCCTTGGGCTGCGGGTCGAGCAGACGCGCGGCGGCGGCGGCGGACCCGCCCGCTTCC
TCCGTCTGCATGAAAAACCCGATTGGAGTACCGCCCAACGGCGTGGGCGTCGCCGTCAGC
TTGCGGGCCGGCGTCCGAATCGGGACGTACCCCGCTGGTGGTGGTAAAACCTTGTACCCA
GCAGGGAACATGGCATCAAGTTCTTCATCAGTATATGGTCTGTTGCGTTCATCTATTTCC
TTCTCCCAACGATAAGCTTGTAGCTGCTCTGGAGTCATCGCTGCTACATGACCAGGTGTT
GGGGTCGCCAAAGCCATGGCCTTCACTCCCACTGGAGTAGACCCTCCTGGCGTAAATACA
GGTGTATGTGGCGTTGGCGTGGATAGCGATGGCGTGGCGTGCGAGGGTGTGGCGTGCGAC
GGCGTGGCGTGCGACGGAGTGGGCGTGGCGGGCGCGGGTGTAGCGCCGGGGGTCTCATCC
CAGCGCGAGCGTCGCTTGGTGCCCGGAGTCGGCGTCTCCTGTATGGTGTCGACACCACTA
CCGCGATCTGTACGCGGCGTCTCAGCCCATCCGCTATTATGTCCCGGTGTTTCTCTATCT
GTTTTAGGGGTTTCATCCCAGCGATTCCTCCTAGAAGCATGGTGGGCAGGTGTCTCGCGA
CCTGGAGTGGCATGTCCAGGTGTGATGTGTCCGGGCGTGGCGTCCCACACTCGAGCGGAT
GGCGTGGCGCCGGGCGTCTCACCACCTCTACCTCCACCACCTGGTGTTTCTTCCCATGTT
CCTCTCTCAGCATCCCAGGATGGTGTAGTCTGAGAAGTTGGTGTAGCTGATATTGTTTTC
TTCACAACTGGAGTTTCATCTGAACTTTGGTCCCATCTACCCTTGCGTTTTGCTGCTGGT
TTTACAGATTCTCCATTTGATTGTGCTACTGGTTTGAGGGTTCCTTCTCTTGCTTTTTCC
AAAAGTTTTTTCCTGAGCTCTGTTTCTTCAGCAAGAAGGTATTGTTCTTTCATTATGTCT
GTGTACGTTCTAGATCCAACATCTGGTGTTTTCCCACCTTCAGCAAATGGATCATTTCTT
TCAGGAGAGATAATCATCCTGCGTCTTTTCTGTCTATATTCATCTTCTCTATCTGCAATT
GTAGGTCTTCTTTTGTCAGCGAAAGGATCAAACTCTTTGTCACTTTGTGCAATGTCATTC
AGTATTGAAGCAGGTGCAGTATAGCCAGGCCTCTTCTGAGAAACTGGTACATTCTCCACA
TCATCATCTTCAACTTCATCATTGGCAGCAATTGATGTCACATATCCATCATATCTGGAT
TTGCCTCCTTGTCCTGAGCTATCATATATGTCACTATCGTAATATGTCTCCCCAAGGGAA
ACACCTTTGTTTGATCCATTTTCCGGCAATTCACTTTTCTTTGACTGTATTTCTCTTATC
TGCGCTTCAATAGCTTCATGAGTTCGTGGTATTTTATCCATGTTTATTAAATTACCGACA
TTTAATAGCAGGATCTAAACAAAATTTTGTATTTTTGGATAAATATTGCTTTGGTCCAAG
CGTGATACCGTAA
(1753 bp)

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