SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36624_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		KDM4_[Bombyx_mori]
Ontology
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0016577 P histone demethylation
GO:0032454 F histone H3-methyl-lysine-9 demethylase activity
GO:0033169 P histone H3-K9 demethylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0051864 F histone H3-methyl-lysine-36 demethylase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070544 P histone H3-K36 demethylation
Transcript
Level		FPKM:4.23 TPM:3.11
ORF EntryO_ErmoMG13775_internal:A_ErmoMG_comp36624_c1_seq1
Sequence
(Nucleotide)
TCTTTCTTAACCTTCTCCTTCTTCGGTTTATCTTTTACTTCTGTTTCGGGTTTGTCGTTT
CTTTTCTTTTTGATTTTCTTTTTATCTTCTGTGCTGCTTTTGTCTGATGTTTGAGTCCTG
GGTGTTTCTGTTGATAGGGGTGGATCAGGTGTGGTTGCCTTTTTGGTATCTACATCGGAA
ATTTTCACAGAGGAAGAATTAGTAGTGGTATTTGCGTCTCCCGTTTCTTCTTCTGATTTT
TTCGCTTTCTTTTTTCGTATTTTAACTGGCTTCTCTTCGGTCTCATCATCTTCTTTCTTC
TTAGGCTCCTTCTTTATACTCTTCTTTTTCTTTGATTTGGCGGTTTTGCGGGAGCTCTTT
GGCGCTTCGTAATCTGAATCGCGGTCAGAGTCCATGTATCCTATGTCGGGTTGCCGTGCC
TCTGACGGATCCATTTCATCACCTTTAAGCCAGATATCTTCAAGAGCATCGAGCTGAGGG
TCATCAGGCTGTATTGGTAGGTTCGGCCGCTTCATCGAAGTCATCATATCGAGATCTCCT
TCTGCCATTGTCATTTCGTCATCGTCCATGACGTCATGGCCGAGGATTGACACCGCTATT
GCACCTTCAGAGATACTCTTGCTTGCCATAGCTCTCTTTAAATGGAGTGGGTGACGCTTT
TTCTTTTTTATACCTTCAATTTCAGCCTCGATAAACGACTCTGGGAGTTCCGTGTTGTTC
TTATTGCAAAGAATGTCTTGTCCCGAAGGATGGGGGGCTGGCATCATCTTCTCTGGTTGT
TCAGGGTGGCAACCAATGTCCTGTCCTTTCAACCAGAGATCGTATCGGTCTGGCTGGAAC
CGCTTCACAAATGTATCCATAGATATTTTAACCATATCGTTGCTGCATGTACACTGCATT
GCCCGCTTTCCGTATTCCACCCATCTGGGAGCAGCAAAATTTGTAGACTCGGCACAATTG
AAACCATGATTGAACCCAGCGTGATAGCCATAAGGAAAAGTGATCATGATTTCGC
(1015 bp)

- SilkBase 1999-2023 -