SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36577_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_39_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
Transcript
Level		FPKM:0.36 TPM:0.26
ORF EntryO_ErmoMG13599_complete:A_ErmoMG_comp36577_c0_seq3
Sequence
(Nucleotide)
TTTTTTTTTTACCATGTTTATGAGATTTATTGCTAAATTAAGGATGTTAATTAATAACCA
TTATAATAACAAACACAAGTCCCTTCTTATTGCGTAGTATACAATAAATCAATATCTGTT
AAAGCTATCGTTGCCTAGTAGGCAATAATAGACTGAGAGCCGTCATTGCATCAGGGAATA
AGGAATGGTAATTGACGAGTGGTACATAGGCTGCCGTGATGACACGACCGGCAAACCATC
TGCCGTGCAAACTGTTCACGGAAGCCACCGCCGTCGCTATCGTGGGACACTTGCAATATA
CATTCCCCTGAGGCGAAGCTTTGTCAACATATACGTGCAGCACTCCGCCATGTTTGTTGC
ACTCACCGATAACGTCATCTCTTATTTCAATATCCCAGCTTGGATTAGTTTCTGTTGCTG
GATCAAACATGTTGTTGAGCATGAAACACTGTGTTGCAATAGGAGGTGCAACTTGAGGTT
GTGGAGACACTAATGCTGAACCACCCCCCATTAATACAGACGCTGCTGCTGGCGGTATCT
GTAAACCAGTTCCCTCTGCTAGTTTAAACATCAACTGTAGACGCCCAGTCGCACCAAGGT
CAATTCCAGCTCGATCCAATTCATCAGCATCAAACCGAGTGCTGGCTCCACCATCTGCAC
GTTCTGTTACATTTCCAACTTTCATAGGTCTTCCCGCTAGCTCAAAACCATTTAATTGTT
CCATAGCTTTCTTGGCATCGCTGGCATGGTGAAACTAAAATTAAATATGTAATGAGTATA
GACTAAATTAAAGAACACATCTTGTGAAACTGTCTTTTTACATTGAAATAGATGATCTGA
AAATGTACAGTGAAGAATAAATAAATAATCGAAATAACAATATAGAAAACGAATATGCCG
CTTGACACGGGCGCTCCAACGTGACCTATCGGGCGGCAGTCGCGTCGTCTAGTCGTCACC
GTCACTTCAGCGTGGCCTTCTATCTAGCTTTAATTAGAAAGTTTTGTTGTTTGTACTTAC
AGTGAGGAATCCATATCCTTTACTTTTACCAGTTTCTGGATCAGTCATTAGTTGTATATG
ATCTATTTTTCCAAATGGTTCAAAAATTCCACGAAGCATGTCTTCTGTAATATTAAAATG
TAAAGATCCCACATAGAGTCTAGTAGGTCCATTATTGGTCTTTGGTGCTAAGTTTGGTAA
TGTATTGCCAACTCGATTTTTTTCAGCTTGTGTATGTTGTACAATTATAGGAACACCCAG
CAACTTTTGTCCGGTTAATCCTAGAGCCAAGGGAACCGATTCAGCATCTTTAAATTCTAT
ATAGGCGATCCCTTTGAACCTCCTGGTTTTATTGCAAGTAATAAGTCTTACGTCTCGTAC
TTTACCTACTGATGAGAAAAATTCTTCCAAATCTTTAGCTCTGATTCTTTGTGACAGTTG
CATGCAAAATACGGTTCTCAAATCTCTTTCTTCTGGAGGTAAATCTTCAAGTTTCGGTTC
TAGTCCTCTCGACTTAGATCTGTATTCATTCTCAGGTTCTCTTTCTGGAGTTTTTTCTTT
TTTCTGAACGTGTTGATCACGACTGCGATCTCTTTCACGGCTTCGTTCCTTGTCTCGGCT
GCGACGCTTGTCTTTGTCTCGGTCCCTTTCCCTCTCGCGGTCCTTGTCCTTGTATCGCTC
TTTGTCTCGATCGCGACGTTCCCTGTCTCGATCTCGTTCTCTCTCTTTCTTATCATCTCG
GTCTTTCGAACGATGCGAGTCCCTATCTCTTGATCTTCTTTTATCTCTAGATCTACTACG
CCTTCTGGATACTTCTCGGTCTCTATCTCTGTGCTTATCTGAGTGCTTGTCTGATCGATG
CTTTGATGAGGAAGTGTTATCCTGTCACACAAAGCACAAGGTAGAAGCAGCGCCACAGCA
ACACACGCCGAGTGAATAAATAAAACGTTAAATAAACCACTGACAAAGGGTGCACACTGC
GTTAACATCACACAGGGATACTTCTCTTGTTTGTTCAGGTCGGTGAAGTATGCTGGACTA
TTACCACAAAGTTCAATTTATTATACGGCGCTTCCAACATAGCCTCAACATCAAAATCTT
CTGCCATTTTGTTTTGGAACTTTTTCTTTAGTTCAATTAATATTTTCGCTCTATTTTGTA
CCTATATTTTTCAGTAAATAAAAAAAGAGACGCTAACTAAAAGCACCACGAAGT
(2214 bp)

- SilkBase 1999-2023 -