SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36555_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_5_[Papilio_xuthus]
Ontology
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008242 F omega peptidase activity
GO:0008270 F zinc ion binding
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0036459 F thiol-dependent deubiquitinase
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0071108 P protein K48-linked deubiquitination
Transcript
Level		FPKM:4.34 TPM:3.19
ORF EntryO_ErmoMG13498_5prime_partial:A_ErmoMG_comp36555_c0_seq1
Sequence
(Nucleotide)
CAATATTTGGTTGTATATGTCATTGAGATCACAGCCTTTCGTAAAGATATAAGTAGCCCA
GATCTTTCGGAGGATTCTCTGAAAGTGCAACCTTGTTATCATTAAATATGACCCATCGTC
CTTCGTGCAGAACATGACACACGTAGTGACCGACCATGGTGGAGGTGCCCATGTGTGATA
TGAAAGCTATCAGCTTGTATTTCTCGGGTCCGTCCCTGCAGCCGAGCGTCCTGTCGGGTG
CGGGGGCGGGTGCGGGGGCGGGCGCGGGGCCGGGCTCGTCGTCGAGCGTGTCGGCGCGGC
TGAAGATCCAGTCGAGTGCGCGGCTGACGTCGCCGCCGGTGGCTCCGAGCGCGCGCACGA
CCTGCGTCCGCGTGAACCCCATGCTCATGATCTGCTCGACGCTGGCCTCGTCGACGTTCA
CAGCTGCTGATGCGTCAGAAGGTTTAGAGCCGGGTGGTTCAAATTTGTTTTCAAAGTCCC
AGTCGGTCATATGTTCCATGAGCCAGTTTGAAGCAGCTTCCATACCAGAGTTGTTTGTGT
AGTATAATGATTTCTTGCACGCTTCTACCGGGAAACCCATGTCCAACAGCTGTGATAGCA
GTGCTTCGTCGTAAGTGGGCGGCGGCGTGTCGGGCGACGCCTCGGGGAGCTGCTTCTCGT
CGGGCTGCAGGCCGCGACCACGGAGACGACTTAGGTCGACCTCCCAAGGCATATCGACTG
CCACATCCAGTTTAGCGGGAGTCCAATCCTCTTTGATGGTAAACTTCTTCAGTTGTATCA
GAAGGTAATCAGGAAACGTTGCCAGACGGGTTATTTTGTGTGCGGTGACTTTCTTGTTGA
CGGCGCTGCTGAAGAACTGTTCAATAGTTTCCTCCTTCATGAAGCTCTCGAGGCAAGCTT
GGAACGGTATGTGTGGCCGAACCACCAGAGATGGGTCTAATCTCTGTCCGCTAGCCTCTG
CGTGTGCCCTCCTGGCCTCGTACTCGTGTACTTGTTCGAGGTTGTCGGCGGCGGCGAGCG
GCACGGACAGCGGGAGGTGGTGCTCGGGCCGCGTGTTGTAGCGCACGCAGTTGGACTCCG
AACATTTGATACGTTCTTCGACGGAGAATTTCAAACAGTCTGACGGGTTTGGTTTGTTTC
GACTGTTGCGCTGCAGCAGCGTCAGTAGATGCAGGTAGAACTCGTGCGCGTCCTGCTGCC
GCTTGGTCGCGAACTCGGCGTGCTGCTTCCCGACCAGCTGCCGGTACATGTGCGGGCTCA
CCCCGAGCTGGCTGCCCTCGCTGTCCGGGGTGGAGTACCGACCCGACAGCAGACCCACGC
CGAGCTTCGCAGTTTGAACATTGAAATCGTTGACCGGATCTTCAGGGAAGGTCGCGAATA
TCTCCGGAGCACCCTCCACGTAGCGACGCACGAAATCAGGCATACGGAACATCACCTGCA
CGACACTGTTGATATAACAAGAGTTTCCCAGGTTGTTGAGTCCAGTCAGAGCTGGTCCGT
GCAGTGGTCTCAAGTCACTCCCGGACTCCTGCAGTGTGTTCCATTCTCCAGAACGTTGGT
TCAGTTCTAGCTCGAGCTCCACCATTGATTTGTCTGTCTTCTGCAGCTGTTGAACGTTGA
TTCCGAAGTGTTTGAGATGGTCAGC
(1645 bp)

- SilkBase 1999-2023 -